Cloud computing services: taxonomy and comparison

Cloud computing is a highly discussed topic in the technical and economic world, and many of the big players of the software industry have entered the development of cloud services. Several companies what to explore the possibilities and benefits of incorporating such cloud computing services in their business, as well as the possibilities to offer own cloud services. However, with the amount of cloud computing services increasing quickly, the need for a taxonomy framework rises. This paper examines the available cloud computing services and identifies and explains their main characteristics. Next, this paper organizes these characteristics and proposes a tree-structured taxonomy. This taxonomy allows quick classifications of the different cloud computing services and makes it easier to compare them. Based on existing taxonomies, this taxonomy provides more detailed characteristics and hierarchies. Additionally, the taxonomy offers a common terminology and baseline information for easy communication. Finally, the taxonomy is explained and verified using existing cloud services as examples

Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV)

The International Committee on Taxonomy of Viruses (ICTV) is charged with the task of developing, refining, and maintaining a universal virus taxonomy. This task encompasses the classification of virus species and higher-level taxa according to the genetic and biological properties of their members; naming virus taxa; maintaining a database detailing the currently approved taxonomy; and providing the database, supporting proposals, and other virus-related information from an open-access, public web site. The ICTV web site (http://ictv.global) provides access to the current taxonomy database in online and downloadable formats, and maintains a complete history of virus taxa back to the first release in 1971. The ICTV has also published the ICTV Report on Virus Taxonomy starting in 1971. This Report provides a comprehensive description of all virus taxa covering virus structure, genome structure, biology and phylogenetics. The ninth ICTV report, published in 2012, is available as an open-access online publication from the ICTV web site. The current, 10th report (http://ictv.global/report/), is being published online, and is replacing the previous hard-copy edition with a completely open access, continuously updated publication. No other database or resource exists that provides such a comprehensive, fully annotated compendium of information on virus taxa and taxonomy

Marine nematode taxonomy in the DNA age: the present and future of molecular tools to access their biodiversity

Molecular taxonomy is one of the most promising yet challenging fields of biology. Molecular markers such as nuclear and mitochondrial genes are being used in a variety of studies surveying marine nematode taxa. Sequences from more than 600 species have been deposited to date in online databases. These barcode sequences are assigned to 150 nominal species from 104 genera. There are 41 species assigned to Enoplea and 109 species to Chromadorea. Morphology-based surveys are greatly limited by processing speed, while barcoding approaches for nematodes are hampered by difficulties in matching sequence data with morphology-based taxonomy. DNA barcoding is a promising approach because some genes contain variable regions that are useful to discriminate species boundaries, discover cryptic species, quantify biodiversity and analyse phylogeny. We advocate a combination of several approaches in studies of molecular taxonomy, DNA barcoding and conventional taxonomy as a necessary step to enhance the knowledge of biodiversity of marine nematodes

Microbial genomic taxonomy

A need for a genomic species definition is emerging from several independent studies worldwide. In this commentary paper, we discuss recent studies on the genomic taxonomy of diverse microbial groups and a unified species definition based on genomics. Accordingly, strains from the same microbial species share >95% Average Amino Acid Identity (AAI) and Average Nucleotide Identity (ANI), >95% identity based on multiple alignment genes, 70% in silico Genome-to-Genome Hybridization similarity (GGDH). Species of the same genus will form monophyletic groups on the basis of 16S rRNA gene sequences, Multilocus Sequence Analysis (MLSA) and supertree analysis. In addition to the established requirements for species descriptions, we propose that new taxa descriptions should also include at least a draft genome sequence of the type strain in order to obtain a clear outlook on the genomic landscape of the novel microbe. The application of the new genomic species definition put forward here will allow researchers to use genome sequences to define simultaneously coherent phenotypic and genomic groups

Toward a Real Simple Taxonomy: Bridging Learners and Content to Create New Value at LearnPhilanthropy

LearnPhilanthropy is bringing together the wealth of research, resources and ideas on good practice from sources across the sector: Imagine a farmer's market providing fresh products from a variety of producers, all in one place, as well as a gathering place where practitioners of all kinds can come together to exchange "recipes" and learning perspectives. A general purpose taxonomy is needed to help make these resources more widely accessible. Yet we've found that a general-purpose taxonomy on grantmaker learning just plain doesn't exist. Our research to date -- conducted in partnership with our Planning Committee, Content Partners, workgroup members and others in the field -- has turned up taxonomies mostly for specific audiences or grantmaker types.For this reason, LearnPhilanthropy developed a general-purpose taxonomy, with an iterative and highly collaborative approach -- more user-generated folksonomy than the traditionally hierarchical taxonomy -- and broad review at each iteration stage. We see this Real Simple Taxonomy as a living document, and encourage ongoing co-creation and co-ownership within the LearnPhilanthropy community

Construction of a taxonomy for requirements engineering commercial-off-the-shelf components

This article presents a procedure for constructing a taxonomy of COTS products in the field of Requirements Engineering (RE). The taxonomy and the obtained information reach transcendental benefits to the selection of systems and tools that aid to RE-related actors to simplify and facilitate their work. This taxonomy is performed by means of a goal-oriented methodology inspired in GBRAM (Goal-Based Requirements Analysis Method), called GBTCM (Goal-Based Taxonomy Construction Method), that provides a guide to analyze sources of information and modeling requirements and domains, as well as gathering and organizing the knowledge in any segment of the COTS market. GBTCM claims to promote the use of standards and the reuse of requirements in order to support different processes of selection and integration of components.Peer ReviewedPostprint (published version

Cueing the Virtual Storyteller: Analysis of cue phrase usage in fairy tales

An existing taxonomy of Dutch cue phrases, designed for use in story generation, was validated by analysing cue phrase usage in a corpus of classical fairy tales. The analysis led to some adaptations of the original taxonomy