Community dynamics of insular biotas in space and time

The various features determining species distributions remain enigmatic in ecology. This thesis deals with the spatial and temporal dynamics of land birds on the islands of the Dahlak archipelago, the Red Sea, and of mammals, birds and reptiles among the forest fragments of the archipelago-like east African coastal forest. The bird species richness on the islands of the Dahlak archipelago depended on area, isolation and extent of habitat. Similarly, species richness of the east African forest fragments was related to area, habitat diversity and isolation but the importance of each factor varied among taxa as well as among generalists and specialists. For example, area influenced species richness of most categories except specialist mammals and reptiles, habitat diversity was more important for forest specialists than generalists, and isolation was important only for birds. In both study areas, similarity in bird species composition decreased with increasing distances among isolates suggesting that dispersal from source pools and among isolates facilitate re-colonization. The nested community structure, i.e. species composition of species−poor communities are a subset of species−rich communities, of birds in the Dahlak archipelago depended on area and the distribution of a few habitats. Similarities in community patterns and cooccurrence patterns, at both community and species levels, were mainly related to habitat preferences and corresponding distributions of habitats as well as inter-island distances. Also, the distributional patterns suggest that predator-prey interactions can be a determinant of the spatial distribution of, at least, the prey. There was no evidence of competitive exclusion. The nested structure on the islands of the Dahlak archipelago remained fairly stable over a period of 35 years even in this arid region. The turnover dynamics were broadly predictable from the nested pattern but not always consistent with other expectations from nested community structure. Taken together my results show that mechanisms on varying spatial and temporal scales act on species distributions, and that the influence may vary among taxa mainly depending on dispersal ability. In the case of conservation, comprehensive strategies accounting for these variations are needed

From pixel to mesh: accurate and straightforward 3D documentation of cultural heritage from the Cres/Lošinj archipelago

Most people like 3D visualizations. Whether it is in movies, holograms or games, 3D (literally) adds an extra dimension to conventional pictures. However, 3D data and their visualizations can also have scientic archaeological benets: they are crucial in removing relief distortions from photographs, facilitate the interpretation of an object or just support the aspiration to document archaeology as exhaustively as possible. Since archaeology is essentially a spatial discipline, the recording of the spatial data component is in most cases of the utmost importance to perform scientic archaeological research. For complex sites and precious artefacts, this can be a di€cult, time-consuming and very expensive operation. In this contribution, it is shown how a straightforward and cost-eective hard- and software combination is used to accurately document and inventory some of the cultural heritage of the Cres/Lošinj archipelago in three or four dimensions. First, standard photographs are acquired from the site or object under study. Secondly, the resulting image collection is processed with some recent advances in computer technology and so-called Structure from Motion (SfM) algorithms, which are known for their ability to reconstruct a sparse point cloud of scenes that were imaged by a series of overlapping photographs. When complemented by multi-view stereo matching algorithms, detailed 3D models can be built from such photo collections in a fully automated way. Moreover, the software packages implementing these tools are available for free or at very low-cost. Using a mixture of archaeological case studies, it will be shown that those computer vision applications produce excellent results from archaeological imagery with little eort needed. Besides serving the purpose of a pleasing 3D visualization for virtual display or publications, the 3D output additionally allows to extract accurate metric information about the archaeology under study (from single artefacts to entire landscapes)

Effects of vessel traffic on relative abundance and behaviour of cetaceans : the case of the bottlenose dolphins in the Archipelago de La Maddalena, north-western Mediterranean sea

Acknowledgements This study was part of the Tursiops Project of the Dolphin Research Centre of Caprera, La Maddalena. Financial and logistical support was provided by the Centro Turistico Studentesco (CTS) and by the National Park of the Archipelago de La Maddalena. We thank the Natural Reserve of Bocche di Bonifacio for the support provided during data collection. The authors thank the numerous volunteers of the Caprera Dolphin Research Centre and especially Marco Ferraro, Mirko Ugo, Angela Pira and Maurizio Piras whose assistance during field observation and skills as a boat driver were invaluable.Peer reviewedPostprin

Isolation and characterization of a thermophilic, obligately anaerobic and heterotrophic marine Chloroflexi bacterium from a Chloroflexi dominated microbial community associated with a Japanese shallow hydrothermal system, and proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.

A novel marine thermophilic and heterotrophic Anaerolineae bacterium in the phylum Chloroflexi, strain SW7T, was isolated from an in situ colonization system deployed in the main hydrothermal vent of the Taketomi submarine hot spring field located on the southern part of Yaeyama Archipelago, Japan. The microbial community associated with the hydrothermal vent was predominated by thermophilic heterotrophs such as Thermococcaceae and Anaerolineae, and the next dominant population was thermophilic sulfur oxidizers. Both aerobic and anaerobic hydrogenotrophs including methanogens were detected as minor populations. During the culture-dependent viable count analysis in this study, an Anaerolineae strain SW7T was isolated from an enrichment culture at a high dilution rate. Strain SW7T was an obligately anaerobic heterotroph grew with fermentation, and non-motile thin rods 3.5-16.5 μm in length and 0.2 μm in width constituting multicellular filament. Growth was observed between 37-65 ℃ (optimum 60℃), pH 5.5-7.3 (optimum pH 6.0), 0.5-3.5% (w/v) NaCl concentration (optimum 1.0%). Based on physiological and phylogenetic features of a new isolate, we propose a new species representing a novel genus Thermomarinilinea: the type strain of Thermomarinilinea lacunofontalis sp. nov., is SW7T (= JCM15506T = KCTC5908T)

Distribution and genetic variability of Staphylinidae across a gradient of anthropogenically influenced insular landscapes

This paper describes the distribution and genetic variability of rove beetles (Coleoptera Staphylinidae) in anthropogenically influenced insular landscapes. The study was conducted in the Azores archipelago, characterized by high anthropogenic influence and landscape fragmentation. Collections were made in five islands, from eight habitats, along a gradient of anthropogenic influence. The species of Staphylinidae from the Azores collected for this study were widely distributed and showed low habitat fidelity. Rove beetle richness was associated with anthropogenic influence and habitat type, increasing from less to more anthropogenic impacted habitats. However, genetic diversity of profiled species (i.e. with three or more specimens per species/habitat) does not seem affected by anthropogenic influence in the different habitat types, isolation or landscape fragmentation. COI haplotypes were, as a rule, not exclusive to a given island or habitat. High level of genetic divergence and nucleotide saturation was found in closely related morphological designated species, demonstrating possible disparities between currently defined taxonomic units based on morphology and molecular phylogenies of Staphylinidae. This study found evidence of cryptic speciation in the Atheta fungi (Gravenhorst) species complex which had thus far remained undetected. Similar trends were found for Oligota parva Kraatz, Oxytelus sculptus Gravenhorst, Oligota pumilio Kiesenwetter. Previous studies with lower taxonomical resolution may have underestimated the biotic diversity reported in the Azores in comparison to other Macaronesian archipelagos.info:eu-repo/semantics/publishedVersio

A revised and updated Odonata checklist of Samoa (Insecta: Odonata)

Odonata records of the Samoan Archipelago are updated and an updated checklist provided. It is part of an ongoing assessment of the fauna, taxonomy and distributionof the Pacific island dragonflies. The checklist follows recent reviews published/prepared about the Solomon Islands, New Caledonia, Fiji and Kingdom of Tonga. This study draws on recent dragonfly records following general insect surveys spanning 2008-2012 funded by Critical Ecosystem Partnership Fund (CEPF) via Conserva-tion International (CI) to the authors and to Secretariat Pacific Regional Environment Program (SPREP) and also by funding from Japan International Cooperation Agency (JICA). Other unpublished data from Samoan Archipelago and Niue are included as well. All, but one, of the newly collected Odonata species are widespread within the Pacific region. Hemicordulia cupricoloris the only species from the recent collections which is endemic to Samoa, previously reported for Savai'i and Upolu Islands. It has neverbeen confirmed since its original description in 1927. The new study shows the species as an inhabitant of high altitude zones of Savai'i. It is recommended inland areas of Savai'i and other islands within the Samoan Archipelago should be targeted in further field studies

Genetic and phenotypic divergence in an island bird: isolation by distance, by colonization or by adaptation?

Discerning the relative roles of adaptive and nonadaptive processes in generating differences among populations and species, as well as how these processes interact, is a fundamental aim in biology. Both genetic and phenotypic divergence across populations can be the product of limited dispersal and gradual genetic drift across populations (isolation by distance), of colonization history and founder effects (isolation by colonization) or of adaptation to different environments preventing migration between populations (isolation by adaptation). Here, we attempt to differentiate between these processes using island populations of Berthelot's pipit (Anthus berthelotii), a passerine bird endemic to three Atlantic archipelagos. Using microsatellite markers and approximate Bayesian computation, we reveal that the northward colonization of this species ca. 8500years ago resulted in genetic bottlenecks in the colonized archipelagos. We then show that high levels of genetic structure exist across archipelagos and that these are consistent with a pattern of isolation by colonization, but not with isolation by distance or adaptation. Finally, we show that substantial morphological divergence also exists and that this is strongly concordant with patterns of genetic structure and bottleneck history, but not with environmental differences or geographic distance. Overall, our data suggest that founder effects are responsible for both genetic and phenotypic changes across archipelagos. Our findings provide a rare example of how founder effects can persist over evolutionary timescales and suggest that they may play an important role in the early stages of speciation

Short term effects of irradiance on the growth of Pterocladiella capillacea (Gelidiales, Rhodophyta)

Pterocladiella capillacea has been economically exploited for agar extraction in the Azores for many years. Harvesting dropped to a full stop in the early 1990s due to a population collapse, but restarted in 2013. Since then it has been intensively harvested and overexploitation must be prevented, with both sustainable harvesting and effective cultivation practices. This study represents the first attempt to determine optimal conditions for P. capillacea production in the Azores, and evaluates its vegetative growth in two experiments using von Stosch’s medium designed to test entire thallus and tips portions response to different irradiances (30, 70 and 150 μmol photons m¯² s¯¹). The best relative growth rate (RGR) was recorded at 150 μmol photons m¯² s¯¹ for the entire thalli and tips after two-weeks and three-weeks, respectively, indicating that an acclimation period is necessary to assure the growth of this alga under experimental conditions. Higher RGR was obtained at higher irradiance (3.98 ± 2.10% fm day¯¹), but overall, growth rates were low or negative. Epiphytes were a serious problem towards the end of the entire thallus experiments, where Feldmannia irregularis proliferate at all irradiances. Future cultivation approaches complemented with other relevant environmental factors (e.g. pH, photoperiod, salinity), are recommended.FCT – Fundação para a Ciência e Tecnologia projects UID/BIA/00329/2013, 2015 - 2018 and UID/BIA/00329/2019, CIRN (Centro de Investigação de Recursos Naturais, University of the Azores), and CIIMAR (Interdisciplinary Centre of Marine and Environmental Research, Porto, Portugal). RFP was supported by a doctoral grant M3.1.2/F/024/2011, Fundo Regional para a Ciência e Tecnologia.info:eu-repo/semantics/publishedVersio

The Pselaphinae (Coleoptera, Staphylinidae) of the Maltese Archipelago

Fourteen pselaphines are recorded from the Maltese Islands three of which are recorded for the first time: Rybaxis longicornis, Tychus jacquelinii, and T. pici. Tychus pici, a North African species that is so far known only from Algeria and Tunisia, is here recorded for the first time for the European territory. Locality and collecting data that were lacking for three other species recorded from Malta in the recently published catalogue of Palaearctic Coleoptera, is also provided. The record of Euplectus brunneus is incorrect and most likely should refer to E. corsicus. An illustrated dichotomous key is included to facilitate identification of Maltese pselaphines.peer-reviewe

Petrology of some oceanic island basalts: PRIMELT2.XLS software for primary magma calculation

PRIMELT2.XLS software is introduced for calculating primary magma composition and mantle potential temperature (TP) from an observed lava composition. It is an upgrade over a previous version in that it includes garnet peridotite melting and it detects complexities that can lead to overestimates in TP by >100°C. These are variations in source lithology, source volatile content, source oxidation state, and clinopyroxene fractionation. Nevertheless, application of PRIMELT2.XLS to lavas from a wide range of oceanic islands reveals no evidence that volatile-enrichment and source fertility are sufficient to produce them. All are associated with thermal anomalies, and this appears to be a prerequisite for their formation. For the ocean islands considered in this work, TP maxima are typically ~1450–1500°C in the Atlantic and 1500–1600°C in the Pacific, substantially greater than ~1350°C for ambient mantle. Lavas from the Galápagos Islands and Hawaii record in their geochemistry high TP maxima and large ranges in both TP and melt fraction over short horizontal distances, a result that is predicted by the mantle plume model