Sparse MRI and CT Reconstruction

Sparse signal reconstruction is of the utmost importance for efficient medical imaging, conducting accurate screening for security and inspection, and for non-destructive testing. The sparsity of the signal is dictated by either feasibility, or the cost and the screening time constraints of the system. In this work, two major sparse signal reconstruction systems such as compressed sensing magnetic resonance imaging (MRI) and sparse-view computed tomography (CT) are investigated. For medical CT, a limited number of views (sparse-view) is an option for whether reducing the amount of ionizing radiation or the screening time and the cost of the procedure. In applications such as non-destructive testing or inspection of large objects, like a cargo container, one angular view can take up to a few minutes for only one slice. On the other hand, some views can be unavailable due to the configuration of the system. A problem of data sufficiency and on how to estimate a tomographic image when the projection data are not ideally sufficient for precise reconstruction is one of two major objectives of this work. Three CT reconstruction methods are proposed: algebraic iterative reconstruction-reprojection (AIRR), sparse-view CT reconstruction based on curvelet and total variation regularization (CTV), and sparse-view CT reconstruction based on nonconvex L1-L2 regularization. The experimental results confirm a high performance based on subjective and objective quality metrics. Additionally, sparse-view neutron-photon tomography is studied based on Monte-Carlo modelling to demonstrate shape reconstruction, material discrimination and visualization based on the proposed 3D object reconstruction method and material discrimination signatures. One of the methods for efficient acquisition of multidimensional signals is the compressed sensing (CS). A significantly low number of measurements can be obtained in different ways, and one is undersampling, that is sampling below the Shannon-Nyquist limit. Magnetic resonance imaging (MRI) suffers inherently from its slow data acquisition. The compressed sensing MRI (CSMRI) offers significant scan time reduction with advantages for patients and health care economics. In this work, three frameworks are proposed and evaluated, i.e., CSMRI based on curvelet transform and total generalized variation (CT-TGV), CSMRI using curvelet sparsity and nonlocal total variation: CS-NLTV, CSMRI that explores shearlet sparsity and nonlocal total variation: SS-NLTV. The proposed methods are evaluated experimentally and compared to the previously reported state-of-the-art methods. Results demonstrate a significant improvement of image reconstruction quality on different medical MRI datasets

Recent Techniques for Regularization in Partial Differential Equations and Imaging

abstract: Inverse problems model real world phenomena from data, where the data are often noisy and models contain errors. This leads to instabilities, multiple solution vectors and thus ill-posedness. To solve ill-posed inverse problems, regularization is typically used as a penalty function to induce stability and allow for the incorporation of a priori information about the desired solution. In this thesis, high order regularization techniques are developed for image and function reconstruction from noisy or misleading data. Specifically the incorporation of the Polynomial Annihilation operator allows for the accurate exploitation of the sparse representation of each function in the edge domain. This dissertation tackles three main problems through the development of novel reconstruction techniques: (i) reconstructing one and two dimensional functions from multiple measurement vectors using variance based joint sparsity when a subset of the measurements contain false and/or misleading information, (ii) approximating discontinuous solutions to hyperbolic partial differential equations by enhancing typical solvers with l1 regularization, and (iii) reducing model assumptions in synthetic aperture radar image formation, specifically for the purpose of speckle reduction and phase error correction. While the common thread tying these problems together is the use of high order regularization, the defining characteristics of each of these problems create unique challenges. Fast and robust numerical algorithms are also developed so that these problems can be solved efficiently without requiring fine tuning of parameters. Indeed, the numerical experiments presented in this dissertation strongly suggest that the new methodology provides more accurate and robust solutions to a variety of ill-posed inverse problems.Dissertation/ThesisDoctoral Dissertation Mathematics 201

On the monotone and primal-dual active set schemes for ℓp\ell^p-type problems, p∈(0,1]p \in (0,1]

Nonsmooth nonconvex optimization problems involving the $\ell^p$ quasi-norm, $p \in (0, 1]$, of a linear map are considered. A monotonically convergent scheme for a regularized version of the original problem is developed and necessary optimality conditions for the original problem in the form of a complementary system amenable for computation are given. Then an algorithm for solving the above mentioned necessary optimality conditions is proposed. It is based on a combination of the monotone scheme and a primal-dual active set strategy. The performance of the two algorithms is studied by means of a series of numerical tests in different cases, including optimal control problems, fracture mechanics and microscopy image reconstruction

ADMM-Net for Communication Interference Removal in Stepped-Frequency Radar

Complex ADMM-Net, a complex-valued neural network architecture inspired by the alternating direction method of multipliers (ADMM), is designed for interference removal in super-resolution stepped frequency radar angle-range-doppler imaging. Tailored to an uncooperative scenario wherein a MIMO radar shares spectrum with communications, the ADMM-Net recovers the radar image---which is assumed to be sparse---and simultaneously removes the communication interference, which is modeled as sparse in the frequency domain owing to spectrum underutilization. The scenario motivates an $\ell_1$-minimization problem whose ADMM iteration, in turn, undergirds the neural network design, yielding a set of generalized ADMM iterations that have learnable hyperparameters and operations. To train the network we use random data generated according to the radar and communication signal models. In numerical experiments ADMM-Net exhibits markedly lower error and computational cost than ADMM and CVX

International Conference on Continuous Optimization (ICCOPT) 2019 Conference Book

The Sixth International Conference on Continuous Optimization took place on the campus of the Technical University of Berlin, August 3-8, 2019. The ICCOPT is a flagship conference of the Mathematical Optimization Society (MOS), organized every three years. ICCOPT 2019 was hosted by the Weierstrass Institute for Applied Analysis and Stochastics (WIAS) Berlin. It included a Summer School and a Conference with a series of plenary and semi-plenary talks, organized and contributed sessions, and poster sessions. This book comprises the full conference program. It contains, in particular, the scientific program in survey style as well as with all details, and information on the social program, the venue, special meetings, and more

Adaptive Regularized Low-Rank Tensor Decomposition for Hyperspectral Image Denoising and Destriping

Hyperspectral images (HSIs) are inevitably degraded by a mixture of various types of noise, such as Gaussian noise, impulse noise, stripe noise, and dead pixels, which greatly limits the subsequent applications. Although various denoising methods have already been developed, accurately recovering the spatial-spectral structure of HSIs remains a challenging problem to be addressed. Furthermore, serious stripe noise, which is common in real HSIs, is still not fully separated by the previous models. In this paper, we propose an adaptive hyperLaplacian regularized low-rank tensor decomposition (LRTDAHL) method for HSI denoising and destriping. On the one hand, the stripe noise is separately modeled by the tensor decomposition, which can effectively encode the spatial-spectral correlation of the stripe noise. On the other hand, adaptive hyper-Laplacian spatial-spectral regularization is introduced to represent the distribution structure of different HSI gradient data by adaptively estimating the optimal hyper-Laplacian parameter, which can reduce the spatial information loss and over-smoothing caused by the previous total variation regularization. The proposed model is solved using the alternating direction method of multipliers (ADMM) algorithm. Extensive simulation and real-data experiments all demonstrate the effectiveness and superiority of the proposed method