Rapid Adaptation of POS Tagging for Domain Specific Uses

Part-of-speech (POS) tagging is a fundamental component for performing natural language tasks such as parsing, information extraction, and question answering. When POS taggers are trained in one domain and applied in significantly different domains, their performance can degrade dramatically. We present a methodology for rapid adaptation of POS taggers to new domains. Our technique is unsupervised in that a manually annotated corpus for the new domain is not necessary. We use suffix information gathered from large amounts of raw text as well as orthographic information to increase the lexical coverage. We present an experiment in the Biological domain where our POS tagger achieves results comparable to POS taggers specifically trained to this domain

A Robust Transformation-Based Learning Approach Using Ripple Down Rules for Part-of-Speech Tagging

In this paper, we propose a new approach to construct a system of transformation rules for the Part-of-Speech (POS) tagging task. Our approach is based on an incremental knowledge acquisition method where rules are stored in an exception structure and new rules are only added to correct the errors of existing rules; thus allowing systematic control of the interaction between the rules. Experimental results on 13 languages show that our approach is fast in terms of training time and tagging speed. Furthermore, our approach obtains very competitive accuracy in comparison to state-of-the-art POS and morphological taggers.Comment: Version 1: 13 pages. Version 2: Submitted to AI Communications - the European Journal on Artificial Intelligence. Version 3: Resubmitted after major revisions. Version 4: Resubmitted after minor revisions. Version 5: to appear in AI Communications (accepted for publication on 3/12/2015

Implementing a Portable Clinical NLP System with a Common Data Model - a Lisp Perspective

This paper presents a Lisp architecture for a portable NLP system, termed LAPNLP, for processing clinical notes. LAPNLP integrates multiple standard, customized and in-house developed NLP tools. Our system facilitates portability across different institutions and data systems by incorporating an enriched Common Data Model (CDM) to standardize necessary data elements. It utilizes UMLS to perform domain adaptation when integrating generic domain NLP tools. It also features stand-off annotations that are specified by positional reference to the original document. We built an interval tree based search engine to efficiently query and retrieve the stand-off annotations by specifying positional requirements. We also developed a utility to convert an inline annotation format to stand-off annotations to enable the reuse of clinical text datasets with inline annotations. We experimented with our system on several NLP facilitated tasks including computational phenotyping for lymphoma patients and semantic relation extraction for clinical notes. These experiments showcased the broader applicability and utility of LAPNLP.Comment: 6 pages, accepted by IEEE BIBM 2018 as regular pape