AstroGrid-D: Grid Technology for Astronomical Science

We present status and results of AstroGrid-D, a joint effort of astrophysicists and computer scientists to employ grid technology for scientific applications. AstroGrid-D provides access to a network of distributed machines with a set of commands as well as software interfaces. It allows simple use of computer and storage facilities and to schedule or monitor compute tasks and data management. It is based on the Globus Toolkit middleware (GT4). Chapter 1 describes the context which led to the demand for advanced software solutions in Astrophysics, and we state the goals of the project. We then present characteristic astrophysical applications that have been implemented on AstroGrid-D in chapter 2. We describe simulations of different complexity, compute-intensive calculations running on multiple sites, and advanced applications for specific scientific purposes, such as a connection to robotic telescopes. We can show from these examples how grid execution improves e.g. the scientific workflow. Chapter 3 explains the software tools and services that we adapted or newly developed. Section 3.1 is focused on the administrative aspects of the infrastructure, to manage users and monitor activity. Section 3.2 characterises the central components of our architecture: The AstroGrid-D information service to collect and store metadata, a file management system, the data management system, and a job manager for automatic submission of compute tasks. We summarise the successfully established infrastructure in chapter 4, concluding with our future plans to establish AstroGrid-D as a platform of modern e-Astronomy.Comment: 14 pages, 12 figures Subjects: data analysis, image processing, robotic telescopes, simulations, grid. Accepted for publication in New Astronom

Towards an Efficient, Scalable Stream Query Operator Framework for Representing and Analyzing Continuous Fields

Advancements in sensor technology have made it less expensive to deploy massive numbers of sensors to observe continuous geographic phenomena at high sample rates and stream live sensor observations. This fact has raised new challenges since sensor streams have pushed the limits of traditional geo-sensor data management technology. Data Stream Engines (DSEs) provide facilities for near real-time processing of streams, however, algorithms supporting representing and analyzing Spatio-Temporal (ST) phenomena are limited. This dissertation investigates near real-time representation and analysis of continuous ST phenomena, observed by large numbers of mobile, asynchronously sampling sensors, using a DSE and proposes two novel stream query operator frameworks. First, the ST Interpolation Stream Query Operator Framework (STI-SQO framework) continuously transforms sensor streams into rasters using a novel set of stream query operators that perform ST-IDW interpolation. A key component of the STI-SQO framework is the 3D, main memory-based, ST Grid Index that enables high performance ST insertion and deletion of massive numbers of sensor observations through Isotropic Time Cell and Time Block-based partitioning. The ST Grid Index facilitates fast ST search for samples using ST shell-based neighborhood search templates, namely the Cylindrical Shell Template and Nested Shell Template. Furthermore, the framework contains the stream-based ST-IDW algorithms ST Shell and ST ak-Shell for high performance, parallel grid cell interpolation. Secondly, the proposed ST Predicate Stream Query Operator Framework (STP-SQO framework) efficiently evaluates value predicates over ST streams of ST continuous phenomena. The framework contains several stream-based predicate evaluation algorithms, including Region-Growing, Tile-based, and Phenomenon-Aware algorithms, that target predicate evaluation to regions with seed points and minimize the number of raster cells that are interpolated when evaluating value predicates. The performance of the proposed frameworks was assessed with regard to prediction accuracy of output results and runtime. The STI-SQO framework achieved a processing throughput of 250,000 observations in 2.5 s with a Normalized Root Mean Square Error under 0.19 using a 500×500 grid. The STP-SQO framework processed over 250,000 observations in under 0.25 s for predicate results covering less than 40% of the observation area, and the Scan Line Region Growing algorithm was consistently the fastest algorithm tested

Distributed top-k aggregation queries at large

Top-k query processing is a fundamental building block for efficient ranking in a large number of applications. Efficiency is a central issue, especially for distributed settings, when the data is spread across different nodes in a network. This paper introduces novel optimization methods for top-k aggregation queries in such distributed environments. The optimizations can be applied to all algorithms that fall into the frameworks of the prior TPUT and KLEE methods. The optimizations address three degrees of freedom: 1) hierarchically grouping input lists into top-k operator trees and optimizing the tree structure, 2) computing data-adaptive scan depths for different input sources, and 3) data-adaptive sampling of a small subset of input sources in scenarios with hundreds or thousands of query-relevant network nodes. All optimizations are based on a statistical cost model that utilizes local synopses, e.g., in the form of histograms, efficiently computed convolutions, and estimators based on order statistics. The paper presents comprehensive experiments, with three different real-life datasets and using the ns-2 network simulator for a packet-level simulation of a large Internet-style network

Model-driven Scheduling for Distributed Stream Processing Systems

Distributed Stream Processing frameworks are being commonly used with the evolution of Internet of Things(IoT). These frameworks are designed to adapt to the dynamic input message rate by scaling in/out.Apache Storm, originally developed by Twitter is a widely used stream processing engine while others includes Flink, Spark streaming. For running the streaming applications successfully there is need to know the optimal resource requirement, as over-estimation of resources adds extra cost.So we need some strategy to come up with the optimal resource requirement for a given streaming application. In this article, we propose a model-driven approach for scheduling streaming applications that effectively utilizes a priori knowledge of the applications to provide predictable scheduling behavior. Specifically, we use application performance models to offer reliable estimates of the resource allocation required. Further, this intuition also drives resource mapping, and helps narrow the estimated and actual dataflow performance and resource utilization. Together, this model-driven scheduling approach gives a predictable application performance and resource utilization behavior for executing a given DSPS application at a target input stream rate on distributed resources.Comment: 54 page

AT-GIS: highly parallel spatial query processing with associative transducers

Users in many domains, including urban planning, transportation, and environmental science want to execute analytical queries over continuously updated spatial datasets. Current solutions for largescale spatial query processing either rely on extensions to RDBMS, which entails expensive loading and indexing phases when the data changes, or distributed map/reduce frameworks, running on resource-hungry compute clusters. Both solutions struggle with the sequential bottleneck of parsing complex, hierarchical spatial data formats, which frequently dominates query execution time. Our goal is to fully exploit the parallelism offered by modern multicore CPUs for parsing and query execution, thus providing the performance of a cluster with the resources of a single machine. We describe AT-GIS, a highly-parallel spatial query processing system that scales linearly to a large number of CPU cores. ATGIS integrates the parsing and querying of spatial data using a new computational abstraction called associative transducers(ATs). ATs can form a single data-parallel pipeline for computation without requiring the spatial input data to be split into logically independent blocks. Using ATs, AT-GIS can execute, in parallel, spatial query operators on the raw input data in multiple formats, without any pre-processing. On a single 64-core machine, AT-GIS provides 3× the performance of an 8-node Hadoop cluster with 192 cores for containment queries, and 10× for aggregation queries

Quality of Service Aware Data Stream Processing for Highly Dynamic and Scalable Applications

Huge amounts of georeferenced data streams are arriving daily to data stream management systems that are deployed for serving highly scalable and dynamic applications. There are innumerable ways at which those loads can be exploited to gain deep insights in various domains. Decision makers require an interactive visualization of such data in the form of maps and dashboards for decision making and strategic planning. Data streams normally exhibit fluctuation and oscillation in arrival rates and skewness. Those are the two predominant factors that greatly impact the overall quality of service. This requires data stream management systems to be attuned to those factors in addition to the spatial shape of the data that may exaggerate the negative impact of those factors. Current systems do not natively support services with quality guarantees for dynamic scenarios, leaving the handling of those logistics to the user which is challenging and cumbersome. Three workloads are predominant for any data stream, batch processing, scalable storage and stream processing. In this thesis, we have designed a quality of service aware system, SpatialDSMS, that constitutes several subsystems that are covering those loads and any mixed load that results from intermixing them. Most importantly, we natively have incorporated quality of service optimizations for processing avalanches of geo-referenced data streams in highly dynamic application scenarios. This has been achieved transparently on top of the codebases of emerging de facto standard best-in-class representatives, thus relieving the overburdened shoulders of the users in the presentation layer from having to reason about those services. Instead, users express their queries with quality goals and our system optimizers compiles that down into query plans with an embedded quality guarantee and leaves logistic handling to the underlying layers. We have developed standard compliant prototypes for all the subsystems that constitutes SpatialDSMS