4,948 research outputs found
Multiscale Computations on Neural Networks: From the Individual Neuron Interactions to the Macroscopic-Level Analysis
We show how the Equation-Free approach for multi-scale computations can be
exploited to systematically study the dynamics of neural interactions on a
random regular connected graph under a pairwise representation perspective.
Using an individual-based microscopic simulator as a black box coarse-grained
timestepper and with the aid of simulated annealing we compute the
coarse-grained equilibrium bifurcation diagram and analyze the stability of the
stationary states sidestepping the necessity of obtaining explicit closures at
the macroscopic level. We also exploit the scheme to perform a rare-events
analysis by estimating an effective Fokker-Planck describing the evolving
probability density function of the corresponding coarse-grained observables
Sensitivity analysis of oscillator models in the space of phase-response curves: Oscillators as open systems
Oscillator models are central to the study of system properties such as
entrainment or synchronization. Due to their nonlinear nature, few
system-theoretic tools exist to analyze those models. The paper develops a
sensitivity analysis for phase-response curves, a fundamental one-dimensional
phase reduction of oscillator models. The proposed theoretical and numerical
analysis tools are illustrated on several system-theoretic questions and models
arising in the biology of cellular rhythms
Dynamics of Current, Charge and Mass
Electricity plays a special role in our lives and life. Equations of electron
dynamics are nearly exact and apply from nuclear particles to stars. These
Maxwell equations include a special term the displacement current (of vacuum).
Displacement current allows electrical signals to propagate through space.
Displacement current guarantees that current is exactly conserved from inside
atoms to between stars, as long as current is defined as Maxwell did, as the
entire source of the curl of the magnetic field. We show how the Bohm
formulation of quantum mechanics allows easy definition of current. We show how
conservation of current can be derived without mention of the polarization or
dielectric properties of matter. Matter does not behave the way physicists of
the 1800's thought it does with a single dielectric constant, a real positive
number independent of everything. Charge moves in enormously complicated ways
that cannot be described in that way, when studied on time scales important
today for electronic technology and molecular biology. Life occurs in ionic
solutions in which charge moves in response to forces not mentioned or
described in the Maxwell equations, like convection and diffusion. Classical
derivations of conservation of current involve classical treatments of
dielectrics and polarization in nearly every textbook. Because real dielectrics
do not behave in a classical way, classical derivations of conservation of
current are often distrusted or even ignored. We show that current is conserved
exactly in any material no matter how complex the dielectric, polarization or
conduction currents are. We believe models, simulations, and computations
should conserve current on all scales, as accurately as possible, because
physics conserves current that way. We believe models will be much more
successful if they conserve current at every level of resolution, the way
physics does.Comment: Version 4 slight reformattin
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