Feature learning in feature-sample networks using multi-objective optimization

Data and knowledge representation are fundamental concepts in machine learning. The quality of the representation impacts the performance of the learning model directly. Feature learning transforms or enhances raw data to structures that are effectively exploited by those models. In recent years, several works have been using complex networks for data representation and analysis. However, no feature learning method has been proposed for such category of techniques. Here, we present an unsupervised feature learning mechanism that works on datasets with binary features. First, the dataset is mapped into a feature--sample network. Then, a multi-objective optimization process selects a set of new vertices to produce an enhanced version of the network. The new features depend on a nonlinear function of a combination of preexisting features. Effectively, the process projects the input data into a higher-dimensional space. To solve the optimization problem, we design two metaheuristics based on the lexicographic genetic algorithm and the improved strength Pareto evolutionary algorithm (SPEA2). We show that the enhanced network contains more information and can be exploited to improve the performance of machine learning methods. The advantages and disadvantages of each optimization strategy are discussed.Comment: 7 pages, 4 figure

A Distributed Frank-Wolfe Algorithm for Communication-Efficient Sparse Learning

Learning sparse combinations is a frequent theme in machine learning. In this paper, we study its associated optimization problem in the distributed setting where the elements to be combined are not centrally located but spread over a network. We address the key challenges of balancing communication costs and optimization errors. To this end, we propose a distributed Frank-Wolfe (dFW) algorithm. We obtain theoretical guarantees on the optimization error $\epsilon$ and communication cost that do not depend on the total number of combining elements. We further show that the communication cost of dFW is optimal by deriving a lower-bound on the communication cost required to construct an $\epsilon$-approximate solution. We validate our theoretical analysis with empirical studies on synthetic and real-world data, which demonstrate that dFW outperforms both baselines and competing methods. We also study the performance of dFW when the conditions of our analysis are relaxed, and show that dFW is fairly robust.Comment: Extended version of the SIAM Data Mining 2015 pape

Evaluation of a Tree-based Pipeline Optimization Tool for Automating Data Science

As the field of data science continues to grow, there will be an ever-increasing demand for tools that make machine learning accessible to non-experts. In this paper, we introduce the concept of tree-based pipeline optimization for automating one of the most tedious parts of machine learning---pipeline design. We implement an open source Tree-based Pipeline Optimization Tool (TPOT) in Python and demonstrate its effectiveness on a series of simulated and real-world benchmark data sets. In particular, we show that TPOT can design machine learning pipelines that provide a significant improvement over a basic machine learning analysis while requiring little to no input nor prior knowledge from the user. We also address the tendency for TPOT to design overly complex pipelines by integrating Pareto optimization, which produces compact pipelines without sacrificing classification accuracy. As such, this work represents an important step toward fully automating machine learning pipeline design.Comment: 8 pages, 5 figures, preprint to appear in GECCO 2016, edits not yet made from reviewer comment