Obstructions to within a few vertices or edges of acyclic

Finite obstruction sets for lower ideals in the minor order are guaranteed to exist by the Graph Minor Theorem. It has been known for several years that, in principle, obstruction sets can be mechanically computed for most natural lower ideals. In this paper, we describe a general-purpose method for finding obstructions by using a bounded treewidth (or pathwidth) search. We illustrate this approach by characterizing certain families of cycle-cover graphs based on the two well-known problems: $k$-{\sc Feedback Vertex Set} and $k$-{\sc Feedback Edge Set}. Our search is based on a number of algorithmic strategies by which large constants can be mitigated, including a randomized strategy for obtaining proofs of minimality.Comment: 16 page

New Results for the MAP Problem in Bayesian Networks

This paper presents new results for the (partial) maximum a posteriori (MAP) problem in Bayesian networks, which is the problem of querying the most probable state configuration of some of the network variables given evidence. First, it is demonstrated that the problem remains hard even in networks with very simple topology, such as binary polytrees and simple trees (including the Naive Bayes structure). Such proofs extend previous complexity results for the problem. Inapproximability results are also derived in the case of trees if the number of states per variable is not bounded. Although the problem is shown to be hard and inapproximable even in very simple scenarios, a new exact algorithm is described that is empirically fast in networks of bounded treewidth and bounded number of states per variable. The same algorithm is used as basis of a Fully Polynomial Time Approximation Scheme for MAP under such assumptions. Approximation schemes were generally thought to be impossible for this problem, but we show otherwise for classes of networks that are important in practice. The algorithms are extensively tested using some well-known networks as well as random generated cases to show their effectiveness.Comment: A couple of typos were fixed, as well as the notation in part of section 4, which was misleading. Theoretical and empirical results have not change

Pre-processing for Triangulation of Probabilistic Networks

The currently most efficient algorithm for inference with a probabilistic network builds upon a triangulation of a network's graph. In this paper, we show that pre-processing can help in finding good triangulations forprobabilistic networks, that is, triangulations with a minimal maximum clique size. We provide a set of rules for stepwise reducing a graph, without losing optimality. This reduction allows us to solve the triangulation problem on a smaller graph. From the smaller graph's triangulation, a triangulation of the original graph is obtained by reversing the reduction steps. Our experimental results show that the graphs of some well-known real-life probabilistic networks can be triangulated optimally just by preprocessing; for other networks, huge reductions in their graph's size are obtained.Comment: Appears in Proceedings of the Seventeenth Conference on Uncertainty in Artificial Intelligence (UAI2001

Matchings with lower quotas: Algorithms and complexity

We study a natural generalization of the maximum weight many-to-one matching problem. We are given an undirected bipartite graph G=(A∪˙P,E)G=(A∪˙P,E) with weights on the edges in E, and with lower and upper quotas on the vertices in P. We seek a maximum weight many-to-one matching satisfying two sets of constraints: vertices in A are incident to at most one matching edge, while vertices in P are either unmatched or they are incident to a number of matching edges between their lower and upper quota. This problem, which we call maximum weight many-to-one matching with lower and upper quotas (WMLQ), has applications to the assignment of students to projects within university courses, where there are constraints on the minimum and maximum numbers of students that must be assigned to each project. In this paper, we provide a comprehensive analysis of the complexity of WMLQ from the viewpoints of classical polynomial time algorithms, fixed-parameter tractability, as well as approximability. We draw the line between NPNP-hard and polynomially tractable instances in terms of degree and quota constraints and provide efficient algorithms to solve the tractable ones. We further show that the problem can be solved in polynomial time for instances with bounded treewidth; however, the corresponding runtime is exponential in the treewidth with the maximum upper quota umaxumax as basis, and we prove that this dependence is necessary unless FPT=W[1]FPT=W[1]. The approximability of WMLQ is also discussed: we present an approximation algorithm for the general case with performance guarantee umax+1umax+1, which is asymptotically best possible unless P=NPP=NP. Finally, we elaborate on how most of our positive results carry over to matchings in arbitrary graphs with lower quotas

Boxicity and separation dimension

A family $\mathcal{F}$ of permutations of the vertices of a hypergraph $H$ is called 'pairwise suitable' for $H$ if, for every pair of disjoint edges in $H$, there exists a permutation in $\mathcal{F}$ in which all the vertices in one edge precede those in the other. The cardinality of a smallest such family of permutations for $H$ is called the 'separation dimension' of $H$ and is denoted by $\pi(H)$. Equivalently, $\pi(H)$ is the smallest natural number $k$ so that the vertices of $H$ can be embedded in $\mathbb{R}^k$ such that any two disjoint edges of $H$ can be separated by a hyperplane normal to one of the axes. We show that the separation dimension of a hypergraph $H$ is equal to the 'boxicity' of the line graph of $H$. This connection helps us in borrowing results and techniques from the extensive literature on boxicity to study the concept of separation dimension.Comment: This is the full version of a paper by the same name submitted to WG-2014. Some results proved in this paper are also present in arXiv:1212.6756. arXiv admin note: substantial text overlap with arXiv:1212.675

Between Treewidth and Clique-width

Many hard graph problems can be solved efficiently when restricted to graphs of bounded treewidth, and more generally to graphs of bounded clique-width. But there is a price to be paid for this generality, exemplified by the four problems MaxCut, Graph Coloring, Hamiltonian Cycle and Edge Dominating Set that are all FPT parameterized by treewidth but none of which can be FPT parameterized by clique-width unless FPT = W[1], as shown by Fomin et al [7, 8]. We therefore seek a structural graph parameter that shares some of the generality of clique-width without paying this price. Based on splits, branch decompositions and the work of Vatshelle [18] on Maximum Matching-width, we consider the graph parameter sm-width which lies between treewidth and clique-width. Some graph classes of unbounded treewidth, like distance-hereditary graphs, have bounded sm-width. We show that MaxCut, Graph Coloring, Hamiltonian Cycle and Edge Dominating Set are all FPT parameterized by sm-width