Big Data Computing for Geospatial Applications

The convergence of big data and geospatial computing has brought forth challenges and opportunities to Geographic Information Science with regard to geospatial data management, processing, analysis, modeling, and visualization. This book highlights recent advancements in integrating new computing approaches, spatial methods, and data management strategies to tackle geospatial big data challenges and meanwhile demonstrates opportunities for using big data for geospatial applications. Crucial to the advancements highlighted in this book is the integration of computational thinking and spatial thinking and the transformation of abstract ideas and models to concrete data structures and algorithms

A review of clustering techniques and developments

© 2017 Elsevier B.V. This paper presents a comprehensive study on clustering: exiting methods and developments made at various times. Clustering is defined as an unsupervised learning where the objects are grouped on the basis of some similarity inherent among them. There are different methods for clustering the objects such as hierarchical, partitional, grid, density based and model based. The approaches used in these methods are discussed with their respective states of art and applicability. The measures of similarity as well as the evaluation criteria, which are the central components of clustering, are also presented in the paper. The applications of clustering in some fields like image segmentation, object and character recognition and data mining are highlighted

Machine Learning Methods for Effectively Discovering Complex Relationships in Graph Data

Graphs are extensively employed in many systems due to their capability to capture the interactions (edges) among data (nodes) in many real-life scenarios. Social networks, biological networks and molecular graphs are some of the domains where data have inherent graph structural information. Built graphs can be used to make predictions in Machine Learning (ML) such as node classifications, link predictions, graph classifications, etc. But, existing ML algorithms hold a core assumption that data instances are independent of each other and hence prevent incorporating graph information into ML. This irregular and variable sized nature of non-Euclidean data makes learning underlying patterns of the graph more sophisticated. One approach is to convert the graph information into a lower dimensional space and use traditional learning methods on the reduced space. Meanwhile, Deep Learning has better performance than ML due to convolutional layers and recurrent layers which consider simple correlations in spatial and temporal data, respectively. This proves the importance of taking data interrelationships into account and Graph Convolutional Networks (GCNs) are inspired by this fact to exploit the structure of graphs to make better inference in both node-centric and graph-centric applications. In this dissertation, the graph based ML prediction is addressed in terms of both node classification and link prediction tasks. At first, GCN is thoroughly studied and compared with other graph embedding methods specific to biological networks. Next, we present several new GCN algorithms to improve the prediction performance related to biomedical networks and medical imaging tasks. A circularRNA (circRNA) and disease association network is modeled for both node classification and link prediction tasks to predict diseases relevant to circRNAs to demonstrate the effectiveness of graph convolutional learning. A GCN based chest X-ray image classification outperforms state-of-the-art transfer learning methods. Next, the graph representation is used to analyze the feature dependencies of data and select an optimal feature subset which respects the original data structure. Finally, the usability of this algorithm is discussed in identifying disease specific genes by exploiting gene-gene interactions

Processamento de eventos complexos como serviço em ambientes multi-nuvem

Orientadores: Luiz Fernando Bittencourt, Miriam Akemi Manabe CapretzTese (doutorado) - Universidade Estadual de Campinas, Instituto de ComputaçãoResumo: O surgimento das tecnologias de dispositivos móveis e da Internet das Coisas, combinada com avanços das tecnologias Web, criou um novo mundo de Big Data em que o volume e a velocidade da geração de dados atingiu uma escala sem precedentes. Por ser uma tecnologia criada para processar fluxos contínuos de dados, o Processamento de Eventos Complexos (CEP, do inglês Complex Event Processing) tem sido frequentemente associado a Big Data e aplicado como uma ferramenta para obter informações em tempo real. Todavia, apesar desta onda de interesse, o mercado de CEP ainda é dominado por soluções proprietárias que requerem grandes investimentos para sua aquisição e não proveem a flexibilidade que os usuários necessitam. Como alternativa, algumas empresas adotam soluções de baixo nível que demandam intenso treinamento técnico e possuem alto custo operacional. A fim de solucionar esses problemas, esta pesquisa propõe a criação de um sistema de CEP que pode ser oferecido como serviço e usado através da Internet. Um sistema de CEP como Serviço (CEPaaS, do inglês CEP as a Service) oferece aos usuários as funcionalidades de CEP aliadas às vantagens do modelo de serviços, tais como redução do investimento inicial e baixo custo de manutenção. No entanto, a criação de tal serviço envolve inúmeros desafios que não são abordados no atual estado da arte de CEP. Em especial, esta pesquisa propõe soluções para três problemas em aberto que existem neste contexto. Em primeiro lugar, para o problema de entender e reusar a enorme variedade de procedimentos para gerência de sistemas CEP, esta pesquisa propõe o formalismo Reescrita de Grafos com Atributos para Gerência de Processamento de Eventos Complexos (AGeCEP, do inglês Attributed Graph Rewriting for Complex Event Processing Management). Este formalismo inclui modelos para consultas CEP e transformações de consultas que são independentes de tecnologia e linguagem. Em segundo lugar, para o problema de avaliar estratégias de gerência e processamento de consultas CEP, esta pesquisa apresenta CEPSim, um simulador de sistemas CEP baseado em nuvem. Por fim, esta pesquisa também descreve um sistema CEPaaS fundamentado em ambientes multi-nuvem, sistemas de gerência de contêineres e um design multiusuário baseado em AGeCEP. Para demonstrar sua viabilidade, o formalismo AGeCEP foi usado para projetar um gerente autônomo e um conjunto de políticas de auto-gerenciamento para sistemas CEP. Além disso, o simulador CEPSim foi minuciosamente avaliado através de experimentos que demonstram sua capacidade de simular sistemas CEP com acurácia e baixo custo adicional de processamento. Por fim, experimentos adicionais validaram o sistema CEPaaS e demonstraram que o objetivo de oferecer funcionalidades CEP como um serviço escalável e tolerante a falhas foi atingido. Em conjunto, esses resultados confirmam que esta pesquisa avança significantemente o estado da arte e também oferece novas ferramentas e metodologias que podem ser aplicadas à pesquisa em CEPAbstract: The rise of mobile technologies and the Internet of Things, combined with advances in Web technologies, have created a new Big Data world in which the volume and velocity of data generation have achieved an unprecedented scale. As a technology created to process continuous streams of data, Complex Event Processing (CEP) has been often related to Big Data and used as a tool to obtain real-time insights. However, despite this recent surge of interest, the CEP market is still dominated by solutions that are costly and inflexible or too low-level and hard to operate. To address these problems, this research proposes the creation of a CEP system that can be offered as a service and used over the Internet. Such a CEP as a Service (CEPaaS) system would give its users CEP functionalities associated with the advantages of the services model, such as no up-front investment and low maintenance cost. Nevertheless, creating such a service involves challenges that are not addressed by current CEP systems. This research proposes solutions for three open problems that exist in this context. First, to address the problem of understanding and reusing existing CEP management procedures, this research introduces the Attributed Graph Rewriting for Complex Event Processing Management (AGeCEP) formalism as a technology- and language-agnostic representation of queries and their reconfigurations. Second, to address the problem of evaluating CEP query management and processing strategies, this research introduces CEPSim, a simulator of cloud-based CEP systems. Finally, this research also introduces a CEPaaS system based on a multi-cloud architecture, container management systems, and an AGeCEP-based multi-tenant design. To demonstrate its feasibility, AGeCEP was used to design an autonomic manager and a selected set of self-management policies. Moreover, CEPSim was thoroughly evaluated by experiments that showed it can simulate existing systems with accuracy and low execution overhead. Finally, additional experiments validated the CEPaaS system and demonstrated it achieves the goal of offering CEP functionalities as a scalable and fault-tolerant service. In tandem, these results confirm this research significantly advances the CEP state of the art and provides novel tools and methodologies that can be applied to CEP researchDoutoradoCiência da ComputaçãoDoutor em Ciência da Computação140920/2012-9CNP

Complex Event Processing as a Service in Multi-Cloud Environments

The rise of mobile technologies and the Internet of Things, combined with advances in Web technologies, have created a new Big Data world in which the volume and velocity of data generation have achieved an unprecedented scale. As a technology created to process continuous streams of data, Complex Event Processing (CEP) has been often related to Big Data and used as a tool to obtain real-time insights. However, despite this recent surge of interest, the CEP market is still dominated by solutions that are costly and inflexible or too low-level and hard to operate. To address these problems, this research proposes the creation of a CEP system that can be offered as a service and used over the Internet. Such a CEP as a Service (CEPaaS) system would give its users CEP functionalities associated with the advantages of the services model, such as no up-front investment and low maintenance cost. Nevertheless, creating such a service involves challenges that are not addressed by current CEP systems. This research proposes solutions for three open problems that exist in this context. First, to address the problem of understanding and reusing existing CEP management procedures, this research introduces the Attributed Graph Rewriting for Complex Event Processing Management (AGeCEP) formalism as a technology- and language-agnostic representation of queries and their reconfigurations. Second, to address the problem of evaluating CEP query management and processing strategies, this research introduces CEPSim, a simulator of cloud-based CEP systems. Finally, this research also introduces a CEPaaS system based on a multi-cloud architecture, container management systems, and an AGeCEP-based multi-tenant design. To demonstrate its feasibility, AGeCEP was used to design an autonomic manager and a selected set of self-management policies. Moreover, CEPSim was thoroughly evaluated by experiments that showed it can simulate existing systems with accuracy and low execution overhead. Finally, additional experiments validated the CEPaaS system and demonstrated it achieves the goal of offering CEP functionalities as a scalable and fault-tolerant service. In tandem, these results confirm this research significantly advances the CEP state of the art and provides novel tools and methodologies that can be applied to CEP research