Graded persistence diagrams and persistence landscapes

We introduce a refinement of the persistence diagram, the graded persistence diagram. It is the Mobius inversion of the graded rank function, which is obtained from the rank function using the unary numeral system. Both persistence diagrams and graded persistence diagrams are integer-valued functions on the Cartesian plane. Whereas the persistence diagram takes non-negative values, the graded persistence diagram takes values of 0, 1, or -1. The sum of the graded persistence diagrams is the persistence diagram. We show that the positive and negative points in the k-th graded persistence diagram correspond to the local maxima and minima, respectively, of the k-th persistence landscape. We prove a stability theorem for graded persistence diagrams: the 1-Wasserstein distance between k-th graded persistence diagrams is bounded by twice the 1-Wasserstein distance between the corresponding persistence diagrams, and this bound is attained. In the other direction, the 1-Wasserstein distance is a lower bound for the sum of the 1-Wasserstein distances between the k-th graded persistence diagrams. In fact, the 1-Wasserstein distance for graded persistence diagrams is more discriminative than the 1-Wasserstein distance for the corresponding persistence diagrams.Comment: accepted for publication in Discrete and Computational Geometr

K-theory of multiparameter persistence modules:Additivity

Persistence modules stratify their underlying parameter space, a quality that makes persistence modules amenable to study via invariants of stratified spaces. In this article, we extend a result previously known only for one-parameter persistence modules to grid multiparameter persistence modules. Namely, we show the K-theory of grid multiparameter persistence modules is additive over strata. This is true for both standard monotone multi-parameter persistence as well as multiparameter notions of zig-zag persistence. We compare our calculations for the specific group K_0 with the recent work of Botnan, Oppermann, and Oudot, highlighting and explaining the differences between our results through an explicit projection map between computed groups

Homological Algebra for Persistence Modules

We develop some aspects of the homological algebra of persistence modules, in both the one-parameter and multi-parameter settings, considered as either sheaves or graded modules. The two theories are different. We consider the graded module and sheaf tensor product and Hom bifunctors as well as their derived functors, Tor and Ext, and give explicit computations for interval modules. We give a classification of injective, projective, and flat interval modules. We state Kunneth theorems and universal coefficient theorems for the homology and cohomology of chain complexes of persistence modules in both the sheaf and graded modules settings and show how these theorems can be applied to persistence modules arising from filtered cell complexes. We also give a Gabriel-Popescu theorem for persistence modules. Finally, we examine categories enriched over persistence modules. We show that the graded module point of view produces a closed symmetric monoidal category that is enriched over itself.Comment: 41 pages, accepted by Foundations of Computational Mathematic

Metrics for generalized persistence modules

We consider the question of defining interleaving metrics on generalized persistence modules over arbitrary preordered sets. Our constructions are functorial, which implies a form of stability for these metrics. We describe a large class of examples, inverse-image persistence modules, which occur whenever a topological space is mapped to a metric space. Several standard theories of persistence and their stability can be described in this framework. This includes the classical case of sublevelset persistent homology. We introduce a distinction between `soft' and `hard' stability theorems. While our treatment is direct and elementary, the approach can be explained abstractly in terms of monoidal functors.Comment: Final version; no changes from previous version. Published online Oct 2014 in Foundations of Computational Mathematics. Print version to appea

Decomposing Multiparameter Persistence Modules

Dey and Xin (J.Appl.Comput.Top., 2022) describe an algorithm to decompose finitely presented multiparameter persistence modules using a matrix reduction algorithm. Their algorithm only works for modules whose generators and relations are distinctly graded. We extend their approach to work on all finitely presented modules and introduce several improvements that lead to significant speed-ups in practice. Our algorithm is fixed-parameter tractable with respect to the maximal number of relations of the same degree and with further optimisation we obtain an O(n³) time algorithm for interval-decomposable modules. In particular, we can decide interval-decomposability in this time. As a by-product to the proofs of correctness we develop a theory of parameter restriction for persistence modules. Our algorithm is implemented as a software library aida, the first to enable the decomposition of large inputs. We show its capabilities via extensive experimental evaluation

Cotorsion torsion triples and the representation theory of filtered hierarchical clustering

We give a full classification of representation types of the subcategories of representations of an $m \times n$ rectangular grid with monomorphisms (dually, epimorphisms) in one or both directions, which appear naturally in the context of clustering as two-parameter persistent homology in degree zero. We show that these subcategories are equivalent to the category of all representations of a smaller grid, modulo a finite number of indecomposables. This equivalence is constructed from a certain cotorsion torsion triple, which is obtained from a tilting subcategory generated by said indecomposables.Comment: 39 pages; corrected the lists appearing in Cor. 1.6 and minor changes throughou