Advances in Hyperspectral Image Classification Methods for Vegetation and Agricultural Cropland Studies

Hyperspectral data are becoming more widely available via sensors on airborne and unmanned aerial vehicle (UAV) platforms, as well as proximal platforms. While space-based hyperspectral data continue to be limited in availability, multiple spaceborne Earth-observing missions on traditional platforms are scheduled for launch, and companies are experimenting with small satellites for constellations to observe the Earth, as well as for planetary missions. Land cover mapping via classification is one of the most important applications of hyperspectral remote sensing and will increase in significance as time series of imagery are more readily available. However, while the narrow bands of hyperspectral data provide new opportunities for chemistry-based modeling and mapping, challenges remain. Hyperspectral data are high dimensional, and many bands are highly correlated or irrelevant for a given classification problem. For supervised classification methods, the quantity of training data is typically limited relative to the dimension of the input space. The resulting Hughes phenomenon, often referred to as the curse of dimensionality, increases potential for unstable parameter estimates, overfitting, and poor generalization of classifiers. This is particularly problematic for parametric approaches such as Gaussian maximum likelihoodbased classifiers that have been the backbone of pixel-based multispectral classification methods. This issue has motivated investigation of alternatives, including regularization of the class covariance matrices, ensembles of weak classifiers, development of feature selection and extraction methods, adoption of nonparametric classifiers, and exploration of methods to exploit unlabeled samples via semi-supervised and active learning. Data sets are also quite large, motivating computationally efficient algorithms and implementations. This chapter provides an overview of the recent advances in classification methods for mapping vegetation using hyperspectral data. Three data sets that are used in the hyperspectral classification literature (e.g., Botswana Hyperion satellite data and AVIRIS airborne data over both Kennedy Space Center and Indian Pines) are described in Section 3.2 and used to illustrate methods described in the chapter. An additional high-resolution hyperspectral data set acquired by a SpecTIR sensor on an airborne platform over the Indian Pines area is included to exemplify the use of new deep learning approaches, and a multiplatform example of airborne hyperspectral data is provided to demonstrate transfer learning in hyperspectral image classification. Classical approaches for supervised and unsupervised feature selection and extraction are reviewed in Section 3.3. In particular, nonlinearities exhibited in hyperspectral imagery have motivated development of nonlinear feature extraction methods in manifold learning, which are outlined in Section 3.3.1.4. Spatial context is also important in classification of both natural vegetation with complex textural patterns and large agricultural fields with significant local variability within fields. Approaches to exploit spatial features at both the pixel level (e.g., co-occurrencebased texture and extended morphological attribute profiles [EMAPs]) and integration of segmentation approaches (e.g., HSeg) are discussed in this context in Section 3.3.2. Recently, classification methods that leverage nonparametric methods originating in the machine learning community have grown in popularity. An overview of both widely used and newly emerging approaches, including support vector machines (SVMs), Gaussian mixture models, and deep learning based on convolutional neural networks is provided in Section 3.4. Strategies to exploit unlabeled samples, including active learning and metric learning, which combine feature extraction and augmentation of the pool of training samples in an active learning framework, are outlined in Section 3.5. Integration of image segmentation with classification to accommodate spatial coherence typically observed in vegetation is also explored, including as an integrated active learning system. Exploitation of multisensor strategies for augmenting the pool of training samples is investigated via a transfer learning framework in Section 3.5.1.2. Finally, we look to the future, considering opportunities soon to be provided by new paradigms, as hyperspectral sensing is becoming common at multiple scales from ground-based and airborne autonomous vehicles to manned aircraft and space-based platforms

A Survey on Evolutionary Computation for Computer Vision and Image Analysis: Past, Present, and Future Trends

Computer vision (CV) is a big and important field in artificial intelligence covering a wide range of applications. Image analysis is a major task in CV aiming to extract, analyse and understand the visual content of images. However, imagerelated tasks are very challenging due to many factors, e.g., high variations across images, high dimensionality, domain expertise requirement, and image distortions. Evolutionary computation (EC) approaches have been widely used for image analysis with significant achievement. However, there is no comprehensive survey of existing EC approaches to image analysis. To fill this gap, this paper provides a comprehensive survey covering all essential EC approaches to important image analysis tasks including edge detection, image segmentation, image feature analysis, image classification, object detection, and others. This survey aims to provide a better understanding of evolutionary computer vision (ECV) by discussing the contributions of different approaches and exploring how and why EC is used for CV and image analysis. The applications, challenges, issues, and trends associated to this research field are also discussed and summarised to provide further guidelines and opportunities for future research

Deep Pyramidal Residual Networks for Spectral-Spatial Hyperspectral Image Classification

Convolutional neural networks (CNNs) exhibit good performance in image processing tasks, pointing themselves as the current state-of-the-art of deep learning methods. However, the intrinsic complexity of remotely sensed hyperspectral images still limits the performance of many CNN models. The high dimensionality of the HSI data, together with the underlying redundancy and noise, often makes the standard CNN approaches unable to generalize discriminative spectral-spatial features. Moreover, deeper CNN architectures also find challenges when additional layers are added, which hampers the network convergence and produces low classification accuracies. In order to mitigate these issues, this paper presents a new deep CNN architecture specially designed for the HSI data. Our new model pursues to improve the spectral-spatial features uncovered by the convolutional filters of the network. Specifically, the proposed residual-based approach gradually increases the feature map dimension at all convolutional layers, grouped in pyramidal bottleneck residual blocks, in order to involve more locations as the network depth increases while balancing the workload among all units, preserving the time complexity per layer. It can be seen as a pyramid, where the deeper the blocks, the more feature maps can be extracted. Therefore, the diversity of high-level spectral-spatial attributes can be gradually increased across layers to enhance the performance of the proposed network with the HSI data. Our experiments, conducted using four well-known HSI data sets and 10 different classification techniques, reveal that our newly developed HSI pyramidal residual model is able to provide competitive advantages (in terms of both classification accuracy and computational time) over the state-of-the-art HSI classification methods

Hyperspectral Mineral Identification using SVM and SOM

Remote sensing techniques involving hyperspectral imagery have applications in a number of sciences that study some aspects of the surface of the planet. The analysis of hyperspectral images is complex because of the large amount of information involved and the noise within that data. Investigating images with regard to identify minerals, rocks, vegetation and other materials is an application of hyperspectral remote sensing in the earth sciences. This thesis evaluates the performance of two classification and clustering techniques on hyperspectral images for mineral identification. Support Vector Machines (SVM) and Self-Organizing Maps (SOM) are applied as classification and clustering techniques, respectively. Principal Component Analysis (PCA) is used to prepare the data to be analyzed. The purpose of using PCA is to reduce the amount of data that needs to be processed by identifying the most important components within the data. A well-studied dataset from Cuprite, Nevada and a dataset of more complex data from Baffin Island were used to assess the performance of these techniques. The main goal of this research study is to evaluate the advantage of training a classifier based on a small amount of data compared to an unsupervised method. Determining the effect of feature extraction on the accuracy of the clustering and classification method is another goal of this research. This thesis concludes that using PCA increases the learning accuracy, and especially so in classification. SVM classifies Cuprite data with a high precision and the SOM challenges SVM on datasets with high level of noise (like Baffin Island)

Mineral identification using data-mining in hyperspectral infrared imagery

Les applications de l’imagerie infrarouge dans le domaine de la géologie sont principalement des applications hyperspectrales. Elles permettent entre autre l’identification minérale, la cartographie, ainsi que l’estimation de la portée. Le plus souvent, ces acquisitions sont réalisées in-situ soit à l’aide de capteurs aéroportés, soit à l’aide de dispositifs portatifs. La découverte de minéraux indicateurs a permis d’améliorer grandement l’exploration minérale. Ceci est en partie dû à l’utilisation d’instruments portatifs. Dans ce contexte le développement de systèmes automatisés permettrait d’augmenter à la fois la qualité de l’exploration et la précision de la détection des indicateurs. C’est dans ce cadre que s’inscrit le travail mené dans ce doctorat. Le sujet consistait en l’utilisation de méthodes d’apprentissage automatique appliquées à l’analyse (au traitement) d’images hyperspectrales prises dans les longueurs d’onde infrarouge. L’objectif recherché étant l’identification de grains minéraux de petites tailles utilisés comme indicateurs minéral -ogiques. Une application potentielle de cette recherche serait le développement d’un outil logiciel d’assistance pour l’analyse des échantillons lors de l’exploration minérale. Les expériences ont été menées en laboratoire dans la gamme relative à l’infrarouge thermique (Long Wave InfraRed, LWIR) de 7.7m à 11.8 m. Ces essais ont permis de proposer une méthode pour calculer l’annulation du continuum. La méthode utilisée lors de ces essais utilise la factorisation matricielle non négative (NMF). En utlisant une factorisation du premier ordre on peut déduire le rayonnement de pénétration, lequel peut ensuite être comparé et analysé par rapport à d’autres méthodes plus communes. L’analyse des résultats spectraux en comparaison avec plusieurs bibliothèques existantes de données a permis de mettre en évidence la suppression du continuum. Les expérience ayant menés à ce résultat ont été conduites en utilisant une plaque Infragold ainsi qu’un objectif macro LWIR. L’identification automatique de grains de différents matériaux tels que la pyrope, l’olivine et le quartz a commencé. Lors d’une phase de comparaison entre des approches supervisées et non supervisées, cette dernière s’est montrée plus approprié en raison du comportement indépendant par rapport à l’étape d’entraînement. Afin de confirmer la qualité de ces résultats quatre expériences ont été menées. Lors d’une première expérience deux algorithmes ont été évalués pour application de regroupements en utilisant l’approche FCC (False Colour Composite). Cet essai a permis d’observer une vitesse de convergence, jusqu’a vingt fois plus rapide, ainsi qu’une efficacité significativement accrue concernant l’identification en comparaison des résultats de la littérature. Cependant des essais effectués sur des données LWIR ont montré un manque de prédiction de la surface du grain lorsque les grains étaient irréguliers avec présence d’agrégats minéraux. La seconde expérience a consisté, en une analyse quantitaive comparative entre deux bases de données de Ground Truth (GT), nommée rigid-GT et observed-GT (rigide-GT: étiquet manuel de la région, observée-GT:étiquetage manuel les pixels). La précision des résultats était 1.5 fois meilleur lorsque l’on a utlisé la base de données observed-GT que rigid-GT. Pour les deux dernières epxérience, des données venant d’un MEB (Microscope Électronique à Balayage) ainsi que d’un microscopie à fluorescence (XRF) ont été ajoutées. Ces données ont permis d’introduire des informations relatives tant aux agrégats minéraux qu’à la surface des grains. Les résultats ont été comparés par des techniques d’identification automatique des minéraux, utilisant ArcGIS. Cette dernière a montré une performance prometteuse quand à l’identification automatique et à aussi été utilisée pour la GT de validation. Dans l’ensemble, les quatre méthodes de cette thèse représentent des méthodologies bénéfiques pour l’identification des minéraux. Ces méthodes présentent l’avantage d’être non-destructives, relativement précises et d’avoir un faible coût en temps calcul ce qui pourrait les qualifier pour être utilisée dans des conditions de laboratoire ou sur le terrain.The geological applications of hyperspectral infrared imagery mainly consist in mineral identification, mapping, airborne or portable instruments, and core logging. Finding the mineral indicators offer considerable benefits in terms of mineralogy and mineral exploration which usually involves application of portable instrument and core logging. Moreover, faster and more mechanized systems development increases the precision of identifying mineral indicators and avoid any possible mis-classification. Therefore, the objective of this thesis was to create a tool to using hyperspectral infrared imagery and process the data through image analysis and machine learning methods to identify small size mineral grains used as mineral indicators. This system would be applied for different circumstances to provide an assistant for geological analysis and mineralogy exploration. The experiments were conducted in laboratory conditions in the long-wave infrared (7.7μm to 11.8μm - LWIR), with a LWIR-macro lens (to improve spatial resolution), an Infragold plate, and a heating source. The process began with a method to calculate the continuum removal. The approach is the application of Non-negative Matrix Factorization (NMF) to extract Rank-1 NMF and estimate the down-welling radiance and then compare it with other conventional methods. The results indicate successful suppression of the continuum from the spectra and enable the spectra to be compared with spectral libraries. Afterwards, to have an automated system, supervised and unsupervised approaches have been tested for identification of pyrope, olivine and quartz grains. The results indicated that the unsupervised approach was more suitable due to independent behavior against training stage. Once these results obtained, two algorithms were tested to create False Color Composites (FCC) applying a clustering approach. The results of this comparison indicate significant computational efficiency (more than 20 times faster) and promising performance for mineral identification. Finally, the reliability of the automated LWIR hyperspectral infrared mineral identification has been tested and the difficulty for identification of the irregular grain’s surface along with the mineral aggregates has been verified. The results were compared to two different Ground Truth(GT) (i.e. rigid-GT and observed-GT) for quantitative calculation. Observed-GT increased the accuracy up to 1.5 times than rigid-GT. The samples were also examined by Micro X-ray Fluorescence (XRF) and Scanning Electron Microscope (SEM) in order to retrieve information for the mineral aggregates and the grain’s surface (biotite, epidote, goethite, diopside, smithsonite, tourmaline, kyanite, scheelite, pyrope, olivine, and quartz). The results of XRF imagery compared with automatic mineral identification techniques, using ArcGIS, and represented a promising performance for automatic identification and have been used for GT validation. In overall, the four methods (i.e. 1.Continuum removal methods; 2. Classification or clustering methods for mineral identification; 3. Two algorithms for clustering of mineral spectra; 4. Reliability verification) in this thesis represent beneficial methodologies to identify minerals. These methods have the advantages to be a non-destructive, relatively accurate and have low computational complexity that might be used to identify and assess mineral grains in the laboratory conditions or in the field

Terrain classification using machine learning algorithms in a multi-temporal approach A QGIS plug-in implementation

Land cover and land use (LCLU) maps are essential for the successful administration of a nation’s topography, however, conventional on-site data gathering methods are costly and time-consuming. By contrast, remote sensing data can be used to generate up-to-date maps regularly with the help of machine learning algorithms, in turn, allowing for the assessment of a region’s dynamics throughout time. The present dissertation will focus on the implementation of an automated land use and land cover classifier based on remote sensing imagery provided by the mod ern sentinel-2 satellite constellation. The project, with Portugal at its focus, will expand on previous approaches by utilizing temporal data as an input variable in order to harvest the contextual information contained in the vegetation cycles. The pursued solution investigated the implementation of a 9-class classifier plug-in for an industry standard, open-source geographic information system. In the course of the testing procedure, various processing techniques and machine learning algorithms were evaluated in a multi-temporal approach. Resulting in a final overall accuracy of 65,9% across the targeted classes.Mapas de uso e ocupação do solo são cruciais para o entendimento e administração da topografia de uma nação, no entanto, os métodos convencionais de aquisição local de dados são caros e demorados. Contrariamente, dados provenientes de métodos de senso riamento remoto podem ser utilizados para gerar regularmente mapas atualizados com a ajuda de algoritmos de aprendizagem automática. Permitindo, por sua vez, a avaliação da dinâmica de uma região ao longo do tempo. Utilizando como base imagens de sensoriamento remoto fornecidas pela recente cons telação de satélites Sentinel-2, a presente dissertação concentra-se na implementação de um classificador de mapas de uso e ocupação do solo automatizado. O projeto, com foco em Portugal, irá procurar expandir abordagens anteriores através do aproveitamento de informação contextual contida nos ciclos vegetativos pela utilização de dados temporais adicionais. A solução adotada investigou a produção e implementação de um classificador geral de 9 classes num plug-in de um sistema de informação geográfico de código aberto. Durante o processo de teste, diversas técnicas de processamento e múltiplos algoritmos de aprendizagem automática foram avaliados numa abordagem multi-temporal, culminando num resultado final de precisão geral de 65,9% nas classes avaliadas

Deep Pyramidal Residual Networks for Spectral-Spatial Hyperspectral Image Classification

Convolutional neural networks (CNNs) exhibit good performance in image processing tasks, pointing themselves as the current state-of-the-art of deep learning methods. However, the intrinsic complexity of remotely sensed hyperspectral images still limits the performance of many CNN models. The high dimensionality of the HSI data, together with the underlying redundancy and noise, often makes the standard CNN approaches unable to generalize discriminative spectral-spatial features. Moreover, deeper CNN architectures also find challenges when additional layers are added, which hampers the network convergence and produces low classification accuracies. In order to mitigate these issues, this paper presents a new deep CNN architecture specially designed for the HSI data. Our new model pursues to improve the spectral-spatial features uncovered by the convolutional filters of the network. Specifically, the proposed residual-based approach gradually increases the feature map dimension at all convolutional layers, grouped in pyramidal bottleneck residual blocks, in order to involve more locations as the network depth increases while balancing the workload among all units, preserving the time complexity per layer. It can be seen as a pyramid, where the deeper the blocks, the more feature maps can be extracted. Therefore, the diversity of high-level spectral-spatial attributes can be gradually increased across layers to enhance the performance of the proposed network with the HSI data. Our experiments, conducted using four well-known HSI data sets and 10 different classification techniques, reveal that our newly developed HSI pyramidal residual model is able to provide competitive advantages (in terms of both classification accuracy and computational time) over the state-of-the-art HSI classification methods

Efficient Data Driven Multi Source Fusion

Data/information fusion is an integral component of many existing and emerging applications; e.g., remote sensing, smart cars, Internet of Things (IoT), and Big Data, to name a few. While fusion aims to achieve better results than what any one individual input can provide, often the challenge is to determine the underlying mathematics for aggregation suitable for an application. In this dissertation, I focus on the following three aspects of aggregation: (i) efficient data-driven learning and optimization, (ii) extensions and new aggregation methods, and (iii) feature and decision level fusion for machine learning with applications to signal and image processing. The Choquet integral (ChI), a powerful nonlinear aggregation operator, is a parametric way (with respect to the fuzzy measure (FM)) to generate a wealth of aggregation operators. The FM has 2N variables and N(2N − 1) constraints for N inputs. As a result, learning the ChI parameters from data quickly becomes impractical for most applications. Herein, I propose a scalable learning procedure (which is linear with respect to training sample size) for the ChI that identifies and optimizes only data-supported variables. As such, the computational complexity of the learning algorithm is proportional to the complexity of the solver used. This method also includes an imputation framework to obtain scalar values for data-unsupported (aka missing) variables and a compression algorithm (lossy or losselss) of the learned variables. I also propose a genetic algorithm (GA) to optimize the ChI for non-convex, multi-modal, and/or analytical objective functions. This algorithm introduces two operators that automatically preserve the constraints; therefore there is no need to explicitly enforce the constraints as is required by traditional GA algorithms. In addition, this algorithm provides an efficient representation of the search space with the minimal set of vertices. Furthermore, I study different strategies for extending the fuzzy integral for missing data and I propose a GOAL programming framework to aggregate inputs from heterogeneous sources for the ChI learning. Last, my work in remote sensing involves visual clustering based band group selection and Lp-norm multiple kernel learning based feature level fusion in hyperspectral image processing to enhance pixel level classification