Evolutionary Strategies for the Design of Binary Linear Codes

The design of binary error-correcting codes is a challenging optimization problem with several applications in telecommunications and storage, which has also been addressed with metaheuristic techniques and evolutionary algorithms. Still, all these efforts focused on optimizing the minimum distance of unrestricted binary codes, i.e., with no constraints on their linearity, which is a desirable property for efficient implementations. In this paper, we present an Evolutionary Strategy (ES) algorithm that explores only the subset of linear codes of a fixed length and dimension. To that end, we represent the candidate solutions as binary matrices and devise variation operators that preserve their ranks. Our experiments show that up to length $n=14$, our ES always converges to an optimal solution with a full success rate, and the evolved codes are all inequivalent to the Best-Known Linear Code (BKLC) given by MAGMA. On the other hand, for larger lengths, both the success rate of the ES as well as the diversity of the evolved codes start to drop, with the extreme case of $(16,8,5)$ codes which all turn out to be equivalent to MAGMA's BKLC.Comment: 15 pages, 3 figures, 3 table

On coding labeled trees

Trees are probably the most studied class of graphs in Computer Science. In this thesis we study bijective codes that represent labeled trees by means of string of node labels. We contribute to the understanding of their algorithmic tractability, their properties, and their applications. The thesis is divided into two parts. In the first part we focus on two types of tree codes, namely Prufer-like codes and Transformation codes. We study optimal encoding and decoding algorithms, both in a sequential and in a parallel setting. We propose a unified approach that works for all Prufer-like codes and a more generic scheme based on the transformation of a tree into a functional digraph suitable for all bijective codes. Our results in this area close a variety of open problems. We also consider possible applications of tree encodings, discussing how to exploit these codes in Genetic Algorithms and in the generation of random trees. Moreover, we introduce a modified version of a known code that, in Genetic Algorithms, outperform all the other known codes. In the second part of the thesis we focus on two possible generalizations of our work. We first take into account the classes of k-trees and k-arch graphs (both superclasses of trees): we study bijective codes for this classes of graphs and their algorithmic feasibility. Then, we shift our attention to Informative Labeling Schemes. In this context labels are no longer considered as simple unique node identifiers, they rather convey information useful to achieve efficient computations on the tree. We exploit this idea to design a concurrent data structure for the lowest common ancestor problem on dynamic trees. We also present an experimental comparison between our labeling scheme and the one proposed by Peleg for static trees

On the Evolution of Boomerang Uniformity in Cryptographic S-boxes

S-boxes are an important primitive that help cryptographic algorithms to be resilient against various attacks. The resilience against specific attacks can be connected with a certain property of an S-box, and the better the property value, the more secure the algorithm. One example of such a property is called boomerang uniformity, which helps to be resilient against boomerang attacks. How to construct S-boxes with good boomerang uniformity is not always clear. There are algebraic techniques that can result in good boomerang uniformity, but the results are still rare. In this work, we explore the evolution of S-boxes with good values of boomerang uniformity. We consider three different encodings and five S-box sizes. For sizes $4\times 4$ and $5\times 5$, we manage to obtain optimal solutions. For $6\times 6$, we obtain optimal boomerang uniformity for the non-APN function. For larger sizes, the results indicate the problem to be very difficult (even more difficult than evolving differential uniformity, which can be considered a well-researched problem).Comment: 15 pages, 3 figures, 4 table

GA: A Package for Genetic Algorithms in R

Genetic algorithms (GAs) are stochastic search algorithms inspired by the basic principles of biological evolution and natural selection. GAs simulate the evolution of living organisms, where the fittest individuals dominate over the weaker ones, by mimicking the biological mechanisms of evolution, such as selection, crossover and mutation. GAs have been successfully applied to solve optimization problems, both for continuous (whether differentiable or not) and discrete functions. This paper describes the R package GA, a collection of general purpose functions that provide a flexible set of tools for applying a wide range of genetic algorithm methods. Several examples are discussed, ranging from mathematical functions in one and two dimensions known to be hard to optimize with standard derivative-based methods, to some selected statistical problems which require the optimization of user defined objective functions. (This paper contains animations that can be viewed using the Adobe Acrobat PDF viewer.

A Tutorial on Clique Problems in Communications and Signal Processing

Since its first use by Euler on the problem of the seven bridges of K\"onigsberg, graph theory has shown excellent abilities in solving and unveiling the properties of multiple discrete optimization problems. The study of the structure of some integer programs reveals equivalence with graph theory problems making a large body of the literature readily available for solving and characterizing the complexity of these problems. This tutorial presents a framework for utilizing a particular graph theory problem, known as the clique problem, for solving communications and signal processing problems. In particular, the paper aims to illustrate the structural properties of integer programs that can be formulated as clique problems through multiple examples in communications and signal processing. To that end, the first part of the tutorial provides various optimal and heuristic solutions for the maximum clique, maximum weight clique, and $k$-clique problems. The tutorial, further, illustrates the use of the clique formulation through numerous contemporary examples in communications and signal processing, mainly in maximum access for non-orthogonal multiple access networks, throughput maximization using index and instantly decodable network coding, collision-free radio frequency identification networks, and resource allocation in cloud-radio access networks. Finally, the tutorial sheds light on the recent advances of such applications, and provides technical insights on ways of dealing with mixed discrete-continuous optimization problems