305 research outputs found
SAGE: Sequential Attribute Generator for Analyzing Glioblastomas using Limited Dataset
While deep learning approaches have shown remarkable performance in many
imaging tasks, most of these methods rely on availability of large quantities
of data. Medical image data, however, is scarce and fragmented. Generative
Adversarial Networks (GANs) have recently been very effective in handling such
datasets by generating more data. If the datasets are very small, however, GANs
cannot learn the data distribution properly, resulting in less diverse or
low-quality results. One such limited dataset is that for the concurrent gain
of 19 and 20 chromosomes (19/20 co-gain), a mutation with positive prognostic
value in Glioblastomas (GBM). In this paper, we detect imaging biomarkers for
the mutation to streamline the extensive and invasive prognosis pipeline. Since
this mutation is relatively rare, i.e. small dataset, we propose a novel
generative framework - the Sequential Attribute GEnerator (SAGE), that
generates detailed tumor imaging features while learning from a limited
dataset. Experiments show that not only does SAGE generate high quality tumors
when compared to standard Deep Convolutional GAN (DC-GAN) and Wasserstein GAN
with Gradient Penalty (WGAN-GP), it also captures the imaging biomarkers
accurately
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