8,993 research outputs found

    Medical imaging analysis with artificial neural networks

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    Given that neural networks have been widely reported in the research community of medical imaging, we provide a focused literature survey on recent neural network developments in computer-aided diagnosis, medical image segmentation and edge detection towards visual content analysis, and medical image registration for its pre-processing and post-processing, with the aims of increasing awareness of how neural networks can be applied to these areas and to provide a foundation for further research and practical development. Representative techniques and algorithms are explained in detail to provide inspiring examples illustrating: (i) how a known neural network with fixed structure and training procedure could be applied to resolve a medical imaging problem; (ii) how medical images could be analysed, processed, and characterised by neural networks; and (iii) how neural networks could be expanded further to resolve problems relevant to medical imaging. In the concluding section, a highlight of comparisons among many neural network applications is included to provide a global view on computational intelligence with neural networks in medical imaging

    A Perspective on the Potential Role of Neuroscience in the Court

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    This Article presents some lessons learned while offering expert testimony on neuroscience in courts. As a biomedical investigator participating in cutting-edge research with clinical and mentoring responsibilities, Dr. Ruben Gur, Ph.D., became involved in court proceedings rather late in his career. Based on the success of Dr. Gur and other research investigators of his generation, who developed and validated advanced methods for linking brain structure and function to behavior, neuroscience findings and procedures became relevant to multiple legal issues, especially related to culpability and mitigation. Dr. Gur found himself being asked to opine in cases where he could contribute expertise on neuropsychological testing and structural and functional neuroimaging. Most of his medical-legal consulting experience has been in capital cases because of the elevated legal requirement for thorough mitigation investigations in such cases, and his limited availability due to his busy schedule as a full-time professor and research investigator who runs the Brain and Behavior Lab at the University of Pennsylvania (“Penn”). Courtroom testimony, however, has not been a topic of his research and so he has not published extensively on the issues in peer-reviewed literature

    Persistent topology for natural data analysis - A survey

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    Natural data offer a hard challenge to data analysis. One set of tools is being developed by several teams to face this difficult task: Persistent topology. After a brief introduction to this theory, some applications to the analysis and classification of cells, lesions, music pieces, gait, oil and gas reservoirs, cyclones, galaxies, bones, brain connections, languages, handwritten and gestured letters are shown

    Human brain-to-brain synchrony in a naturalistic setting: an fMRI study on observational learning

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    PARALLEL INDEPENDENT COMPONENT ANALYSIS WITH REFERENCE FOR IMAGING GENETICS: A SEMI-BLIND MULTIVARIATE APPROACH

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    Imaging genetics is an emerging field dedicated to the study of genetic underpinnings of brain structure and function. Over the last decade, brain imaging techniques such as magnetic resonance imaging (MRI) have been increasingly applied to measure morphometry, task-based function and connectivity in living brains. Meanwhile, high-throughput genotyping employing genome-wide techniques has made it feasible to sample the entire genome of a substantial number of individuals. While there is growing interest in image-wide and genome-wide approaches which allow unbiased searches over a large range of variants, one of the most challenging problems is the correction for the huge number of statistical tests used in univariate models. In contrast, a reference-guided multivariate approach shows specific advantage for simultaneously assessing many variables for aggregate effects while leveraging prior information. It can improve the robustness of the results compared to a fully blind approach. In this dissertation we present a semi-blind multivariate approach, parallel independent component analysis with reference (pICA-R), to better reveal relationships between hidden factors of particular attributes. First, a consistency-based order estimation approach is introduced to advance the application of ICA to genotype data. The pICA-R approach is then presented, where independent components are extracted from two modalities in parallel and inter-modality associations are subsequently optimized for pairs of components. In particular, prior information is incorporated to elicit components of particular interests, which helps identify factors carrying small amounts of variance in large complex datasets. The pICA-R approach is further extended to accommodate multiple references whose interrelationships are unknown, allowing the investigation of functional influence on neurobiological traits of potentially related genetic variants implicated in biology. Applied to a schizophrenia study, pICA-R reveals that a complex genetic factor involving multiple pathways underlies schizophrenia-related gray matter deficits in prefrontal and temporal regions. The extended multi-reference approach, when employed to study alcohol dependence, delineates a complex genetic architecture, where the CREB-BDNF pathway plays a key role in the genetic factor underlying a proportion of variation in cue-elicited brain activations, which plays a role in phenotypic symptoms of alcohol dependence. In summary, our work makes several important contributions to advance the application of ICA to imaging genetics studies, which holds the promise to improve our understating of genetics underlying brain structure and function in healthy and disease
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