A bioturbation classification of European marine infaunal invertebrates

Bioturbation, the biogenic modification of sediments through particle reworking and burrow ventilation, is a key mediator of many important geochemical processes in marine systems. In situ quantification of bioturbation can be achieved in a myriad of ways, requiring expert knowledge, technology, and resources not always available, and not feasible in some settings. Where dedicated research programmes do not exist, a practical alternative is the adoption of a trait-based approach to estimate community bioturbation potential (BPc). This index can be calculated from inventories of species, abundance and biomass data (routinely available for many systems), and a functional classification of organism traits associated with sediment mixing (less available). Presently, however, there is no agreed standard categorization for the reworking mode and mobility of benthic species. Based on information from the literature and expert opinion, we provide a functional classification for 1033 benthic invertebrate species from the northwest European continental shelf, as a tool to enable the standardized calculation of BPc in the region. Future uses of this classification table will increase the comparability and utility of large-scale assessments of ecosystem processes and functioning influenced by bioturbation (e.g., to support legislation). The key strengths, assumptions, and limitations of BPc as a metric are critically reviewed, offering guidelines for its calculation and application

Feasibility studies in relation to the IMO Ballast Water Convention

This project is aimed to develop possibilities to overcome the difficulties which arise from the implementation of the Ballast Water Convention (IMO 2004). For this purpose, three feasibility studies have been conducted: assessment of the applicability of small scale test systems; development of protocols for testing active substance residues; risk assessment of ballast water discharge

KEMERATAAN DECAPODA MALACOSTRACA SEBAGAI EPIBENTHOS DI EKOSISTEM MANGROVE KECAMATAN SAMPOINIT KABUPATEN ACEH JAYA

Tujuan penelitian (1)Mengkaji jumlah spesies dari Decapoda anggota Kelas Malacostraca bersifat Epibenthos yang terdapat dalam kawasan Ekosistem Mangrove  Kecamatan Sampoiit Kabupaten Aceh Jaya, dan (2) Menganalisis tingkat kemerataan spesies dari Decapoda anggota Kelas Malacostraca bersifat Epibenthos  yang terdapat dalam kawasan  Ekosistem mangrove  Kecamatan Sampoiit Kabupaten Aceh Jaya Provinsi Aceh. Kegiatan pengambilan datadilaksanakan di kawasan perairan ekosistem mangrove Kecamatan Sampoinit Kabupaten Aceh Jaya Provinsi Aceh, pada Bulan Juni sampai Bulan Maret 2020. Data diambil pada kawasan mangrove  Krueng No, kawasan mangrove Crakmoeng,dan di kawasan mangrove Meunasah Kulam Kecamatan Sampoinit Kabupaten Aceh Jaya Provinsi Aceh. Setiap kawasan mangrove ditetapkan 3 stasion dan setiap stasion ditetapkan 3 plot. Analisis jumlah spesies dilakukan secara deskriptif, sedangkan anlisis tingkat kemerataan dilakukan dengan rumus Kemerataan Piloeu. Hasil diperoleh (1) Terdapat 20 spesies Decapoda dari Kelas Malacostraca, dan (2) Indek kemerataan spesies dari Decapoda anggota Kelas Malacostraca bersifat Epibenthos  yang terdapat dalam kawasan  Ekosistem mangrove  Kecamatan Sampoiit Kabupaten Aceh Jaya adalah 0,948-0,977. Kesimpulan diperoleh adalah (1) Terdapat 20 spesies dari Decapoda anggota Kelas Malacostraca bersifat Epibenthos, dan (2) Tingkat kemerataan spesies dari Decapoda anggota Kelas Malacostraca bersifat Epibenthos  terdapat dalam kawasan ekosistem mangrove  Kecamatan Sampoiit Kabupaten Aceh Jaya adalah tinggi. 

Composition and distribution of the peracarid crustacean fauna along a latitudinal transect off Victoria Land (Ross Sea, Antarctica) with special emphasis on the Cumacea

The following study was the first to describe composition and structure of the peracarid fauna systematically along a latitudinal transect off Victoria Land (Ross Sea, Antarctica). During the 19th Antarctic expedition of the Italian research vessel “Italica” in February 2004, macrobenthic samples were collected by means of a Rauschert dredge with a mesh size of 500 m at depths between 85 and 515 m. The composition of peracarid crustaceans, especially Cumacea was investigated. Peracarida contributed 63% to the total abundance of the fauna. The peracarid samples were dominated by amphipods (66%), whereas cumaceans were represented with 7%. Previously, only 13 cumacean species were known, now the number of species recorded from the Ross Sea increased to 34. Thus, the cumacean fauna of the Ross Sea, which was regarded as the poorest in terms of species richness, has to be considered as equivalent to that of other high Antarctic areas. Most important cumacean families concerning abundance and species richness were Leuconidae, Nannastacidae, and Diastylidae. Cumacean diversity was lowest at the northernmost area (Cape Adare). At the area off Coulman Island, which is characterized by muddy sediment, diversity was highest. Diversity and species number were higher at the deeper stations and abundance increased with latitude. A review of the bathymetric distribution of the Cumacea from the Ross Sea reveals that most species distribute across the Antarctic continental shelf and slope. So far, only few deep-sea records justify the assumption of a shallow-water–deep-sea relationship in some species of Ross Sea Cumacea, which is discussed from an evolutionary point of view

Marine Biodiversity and Ecosystem Health of Ilhas Selvagens, Portugal

In September 2015, National Geographic's Pristine Seas project, in conjunction with the Instituto Universitário-Portugal, The Waitt Institute, the University of Western Australia, and partners conducted a comprehensive assessment of the rarely surveyed Ilhas Selvagens to explore the marine environment, especially the poorly understood deep sea and open ocean areas, and quantify the biodiversity of the nearshore marine environment

Differences in the trophic ecology of micronekton driven by diel vertical migration.

Many species of micronekton perform diel vertical migrations (DVMs), which ultimately contributes to carbon export to the deep sea. However, not all micronekton species perform DVM, and the nonmigrators, which are often understudied, have different energetic requirements that might be reflected in their trophic ecology. We analyze bulk tissue and whole animal stable nitrogen isotopic compositions (δ 15N values) of micronekton species collected seasonally between 0 and 1250 m depth to explore differences in the trophic ecology of vertically migrating and nonmigrating micronekton in the central North Pacific. Nonmigrating species exhibit depth-related increases in δ 15N values mirroring their main prey, zooplankton. Higher variance in δ 15N values of bathypelagic species points to the increasing reliance of deeper dwelling micronekton on microbially reworked, very small suspended particles. Migrators have higher δ 15N values than nonmigrators inhabiting the epipelagic zone, suggesting the consumption of material during the day at depth, not only at night when they migrate closer to the surface. Migrating species also appear to eat larger prey and exhibit a higher range of variation in δ 15N values seasonally than nonmigrators, likely because of their higher energy needs. The dependence on material at depth enriched in 15N relative to surface particles is higher in migratory fish that ascend only to the lower epipelagic zone. Our results confirm that stark differences in the food habits and dietary sources of micronekton species are driven by vertical migrations

British freshwater Malacostracan

This short divertissement touches lightly on the vagaries of vernacular names for culinary and other crustaceans, gives a thumbnail sketch of the distribution of the common and less well-known freshwate

LTR-retrotransposons in R. exoculata and other crustaceans

Transposable elements are major constituents of eukaryote genomes and have a great impact on genome structure and stability. They can contribute to the genetic diversity and evolution of organisms. Knowledge of their distribution among several genomes is an essential condition to study their dynamics and to better understand their role in species evolution. LTR-retrotransposons have been reported in many diverse eukaryote species, describing a ubiquitous distribution. Given their abundance, diversity and their extended ranges in C-values, environment and life styles, crustaceans are a great taxon to investigate the genomic component of adaptation and its possible relationships with TEs. However, crustaceans have been greatly underrepresented in transposable element studies. Using both degenerate PCR and in silico approaches, we have identified 35 Copia and 46 Gypsy families in 15 and 18 crustacean species, respectively. In particular, we characterized several full-length elements from the shrimp Rimicaris exoculata that is listed as a model organism from hydrothermal vents. Phylogenic analyses show that Copia and Gypsy retrotransposons likely present two opposite dynamics within crustaceans. The Gypsy elements appear relatively frequent and diverse whereas Copia are much more homogeneous, as 29 of them belong to the single GalEa clade, and species- or lineage-dependent. Our results also support the hypothesis of the Copia retrotransposon scarcity in metazoans compared to Gypsy elements. In such a context, the GalEa-like elements present an outstanding wide distribution among eukaryotes, from fishes to red algae, and can be even highly predominant within a large taxon, such as Malacostraca. Their distribution among crustaceans suggests a dynamics that follows a "domino days spreading" branching process in which successive amplifications may interact positively

Taxonomy of the spring dwelling amphipod Synurella ambulans (Crustacea: Crangonyctidae) in West Russia: with notes on its distribution and ecology

This study deals with taxonomic problems of the semi-subterranean crangonyctid amphipod Synurella ambulans (F. Müller, 1846), well-known from various freshwater habitats in Europe. The taxonomy of the species S. ambulans and the generic diagnosis for the genus Synurella are revised. A new synonymy is proposed: Synurella ambulans (F. Müller, 1846) = Synurella ambulans meschtscherica Borutzky, 1929, syn. nov. The affinity with the related groups, distribution and ecology of the species are examined