MDS matrices over small fields: A proof of the GM-MDS conjecture

An MDS matrix is a matrix whose minors all have full rank. A question arising in coding theory is what zero patterns can MDS matrices have. There is a natural combinatorial characterization (called the MDS condition) which is necessary over any field, as well as sufficient over very large fields by a probabilistic argument. Dau et al. (ISIT 2014) conjectured that the MDS condition is sufficient over small fields as well, where the construction of the matrix is algebraic instead of probabilistic. This is known as the GM-MDS conjecture. Concretely, if a $k \times n$ zero pattern satisfies the MDS condition, then they conjecture that there exists an MDS matrix with this zero pattern over any field of size $|\mathbb{F}| \ge n+k-1$. In recent years, this conjecture was proven in several special cases. In this work, we resolve the conjecture

Visualizing Random Forest with Self-Organising Map

Random Forest (RF) is a powerful ensemble method for classification and regression tasks. It consists of decision trees set. Although, a single tree is well interpretable for human, the ensemble of trees is a black-box model. The popular technique to look inside the RF model is to visualize a RF proximity matrix obtained on data samples with Multidimensional Scaling (MDS) method. Herein, we present a novel method based on Self-Organising Maps (SOM) for revealing intrinsic relationships in data that lay inside the RF used for classification tasks. We propose an algorithm to learn the SOM with the proximity matrix obtained from the RF. The visualization of RF proximity matrix with MDS and SOM is compared. What is more, the SOM learned with the RF proximity matrix has better classification accuracy in comparison to SOM learned with Euclidean distance. Presented approach enables better understanding of the RF and additionally improves accuracy of the SOM

Block-Diagonal and LT Codes for Distributed Computing With Straggling Servers

We propose two coded schemes for the distributed computing problem of multiplying a matrix by a set of vectors. The first scheme is based on partitioning the matrix into submatrices and applying maximum distance separable (MDS) codes to each submatrix. For this scheme, we prove that up to a given number of partitions the communication load and the computational delay (not including the encoding and decoding delay) are identical to those of the scheme recently proposed by Li et al., based on a single, long MDS code. However, due to the use of shorter MDS codes, our scheme yields a significantly lower overall computational delay when the delay incurred by encoding and decoding is also considered. We further propose a second coded scheme based on Luby Transform (LT) codes under inactivation decoding. Interestingly, LT codes may reduce the delay over the partitioned scheme at the expense of an increased communication load. We also consider distributed computing under a deadline and show numerically that the proposed schemes outperform other schemes in the literature, with the LT code-based scheme yielding the best performance for the scenarios considered.Comment: To appear in IEEE Transactions on Communication

Balanced Sparsest Generator Matrices for MDS Codes

We show that given $n$ and $k$, for $q$ sufficiently large, there always exists an $[n, k]_q$ MDS code that has a generator matrix $G$ satisfying the following two conditions: (C1) Sparsest: each row of $G$ has Hamming weight $n - k + 1$; (C2) Balanced: Hamming weights of the columns of $G$ differ from each other by at most one.Comment: 5 page

A Unified Coded Deep Neural Network Training Strategy Based on Generalized PolyDot Codes for Matrix Multiplication

This paper has two contributions. First, we propose a novel coded matrix multiplication technique called Generalized PolyDot codes that advances on existing methods for coded matrix multiplication under storage and communication constraints. This technique uses "garbage alignment," i.e., aligning computations in coded computing that are not a part of the desired output. Generalized PolyDot codes bridge between Polynomial codes and MatDot codes, trading off between recovery threshold and communication costs. Second, we demonstrate that Generalized PolyDot can be used for training large Deep Neural Networks (DNNs) on unreliable nodes prone to soft-errors. This requires us to address three additional challenges: (i) prohibitively large overhead of coding the weight matrices in each layer of the DNN at each iteration; (ii) nonlinear operations during training, which are incompatible with linear coding; and (iii) not assuming presence of an error-free master node, requiring us to architect a fully decentralized implementation without any "single point of failure." We allow all primary DNN training steps, namely, matrix multiplication, nonlinear activation, Hadamard product, and update steps as well as the encoding/decoding to be error-prone. We consider the case of mini-batch size $B=1$, as well as $B>1$, leveraging coded matrix-vector products, and matrix-matrix products respectively. The problem of DNN training under soft-errors also motivates an interesting, probabilistic error model under which a real number $(P,Q)$ MDS code is shown to correct $P-Q-1$ errors with probability $1$ as compared to $\lfloor \frac{P-Q}{2} \rfloor$ for the more conventional, adversarial error model. We also demonstrate that our proposed strategy can provide unbounded gains in error tolerance over a competing replication strategy and a preliminary MDS-code-based strategy for both these error models.Comment: Presented in part at the IEEE International Symposium on Information Theory 2018 (Submission Date: Jan 12 2018); Currently under review at the IEEE Transactions on Information Theor