Improved Nearly-MDS Expander Codes

A construction of expander codes is presented with the following three properties: (i) the codes lie close to the Singleton bound, (ii) they can be encoded in time complexity that is linear in their code length, and (iii) they have a linear-time bounded-distance decoder. By using a version of the decoder that corrects also erasures, the codes can replace MDS outer codes in concatenated constructions, thus resulting in linear-time encodable and decodable codes that approach the Zyablov bound or the capacity of memoryless channels. The presented construction improves on an earlier result by Guruswami and Indyk in that any rate and relative minimum distance that lies below the Singleton bound is attainable for a significantly smaller alphabet size.Comment: Part of this work was presented at the 2004 IEEE Int'l Symposium on Information Theory (ISIT'2004), Chicago, Illinois (June 2004). This work was submitted to IEEE Transactions on Information Theory on January 21, 2005. To appear in IEEE Transactions on Information Theory, August 2006. 12 page

Gradient Coding from Cyclic MDS Codes and Expander Graphs

Gradient coding is a technique for straggler mitigation in distributed learning. In this paper we design novel gradient codes using tools from classical coding theory, namely, cyclic MDS codes, which compare favorably with existing solutions, both in the applicable range of parameters and in the complexity of the involved algorithms. Second, we introduce an approximate variant of the gradient coding problem, in which we settle for approximate gradient computation instead of the exact one. This approach enables graceful degradation, i.e., the $\ell_2$ error of the approximate gradient is a decreasing function of the number of stragglers. Our main result is that normalized adjacency matrices of expander graphs yield excellent approximate gradient codes, which enable significantly less computation compared to exact gradient coding, and guarantee faster convergence than trivial solutions under standard assumptions. We experimentally test our approach on Amazon EC2, and show that the generalization error of approximate gradient coding is very close to the full gradient while requiring significantly less computation from the workers

Correcting a Fraction of Errors in Nonbinary Expander Codes with Linear Programming

A linear-programming decoder for \emph{nonbinary} expander codes is presented. It is shown that the proposed decoder has the maximum-likelihood certificate properties. It is also shown that this decoder corrects any pattern of errors of a relative weight up to approximately 1/4 \delta_A \delta_B (where \delta_A and \delta_B are the relative minimum distances of the constituent codes).Comment: Part of this work was presented at the IEEE International Symposium on Information Theory 2009, Seoul, Kore

Noise-Resilient Group Testing: Limitations and Constructions

We study combinatorial group testing schemes for learning $d$-sparse Boolean vectors using highly unreliable disjunctive measurements. We consider an adversarial noise model that only limits the number of false observations, and show that any noise-resilient scheme in this model can only approximately reconstruct the sparse vector. On the positive side, we take this barrier to our advantage and show that approximate reconstruction (within a satisfactory degree of approximation) allows us to break the information theoretic lower bound of $\tilde{\Omega}(d^2 \log n)$ that is known for exact reconstruction of $d$-sparse vectors of length $n$ via non-adaptive measurements, by a multiplicative factor $\tilde{\Omega}(d)$. Specifically, we give simple randomized constructions of non-adaptive measurement schemes, with $m=O(d \log n)$ measurements, that allow efficient reconstruction of $d$-sparse vectors up to $O(d)$ false positives even in the presence of $\delta m$ false positives and $O(m/d)$ false negatives within the measurement outcomes, for any constant $\delta < 1$. We show that, information theoretically, none of these parameters can be substantially improved without dramatically affecting the others. Furthermore, we obtain several explicit constructions, in particular one matching the randomized trade-off but using $m = O(d^{1+o(1)} \log n)$ measurements. We also obtain explicit constructions that allow fast reconstruction in time \poly(m), which would be sublinear in $n$ for sufficiently sparse vectors. The main tool used in our construction is the list-decoding view of randomness condensers and extractors.Comment: Full version. A preliminary summary of this work appears (under the same title) in proceedings of the 17th International Symposium on Fundamentals of Computation Theory (FCT 2009

Near-Linear Time Insertion-Deletion Codes and (1+ε\varepsilon)-Approximating Edit Distance via Indexing

We introduce fast-decodable indexing schemes for edit distance which can be used to speed up edit distance computations to near-linear time if one of the strings is indexed by an indexing string $I$. In particular, for every length $n$ and every $\varepsilon >0$, one can in near linear time construct a string $I \in \Sigma'^n$ with $|\Sigma'| = O_{\varepsilon}(1)$, such that, indexing any string $S \in \Sigma^n$, symbol-by-symbol, with $I$ results in a string $S' \in \Sigma''^n$ where $\Sigma'' = \Sigma \times \Sigma'$ for which edit distance computations are easy, i.e., one can compute a $(1+\varepsilon)$-approximation of the edit distance between $S'$ and any other string in $O(n \text{poly}(\log n))$ time. Our indexing schemes can be used to improve the decoding complexity of state-of-the-art error correcting codes for insertions and deletions. In particular, they lead to near-linear time decoding algorithms for the insertion-deletion codes of [Haeupler, Shahrasbi; STOC `17] and faster decoding algorithms for list-decodable insertion-deletion codes of [Haeupler, Shahrasbi, Sudan; ICALP `18]. Interestingly, the latter codes are a crucial ingredient in the construction of fast-decodable indexing schemes