Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

The Radon transform and its adjoint, the back-projection operator, can both be expressed as convolutions in log-polar coordinates. Hence, fast algorithms for the application of the operators can be constructed by using FFT, if data is resampled at log-polar coordinates. Radon data is typically measured on an equally spaced grid in polar coordinates, and reconstructions are represented (as images) in Cartesian coordinates. Therefore, in addition to FFT, several steps of interpolation have to be conducted in order to apply the Radon transform and the back-projection operator by means of convolutions. Both the interpolation and the FFT operations can be efficiently implemented on Graphical Processor Units (GPUs). For the interpolation, it is possible to make use of the fact that linear interpolation is hard-wired on GPUs, meaning that it has the same computational cost as direct memory access. Cubic order interpolation schemes can be constructed by combining linear interpolation steps which provides important computation speedup. We provide details about how the Radon transform and the back-projection can be implemented efficiently as convolution operators on GPUs. For large data sizes, speedups of about 10 times are obtained in relation to the computational times of other software packages based on GPU implementations of the Radon transform and the back-projection operator. Moreover, speedups of more than a 1000 times are obtained against the CPU-implementations provided in the MATLAB image processing toolbox

Fast hyperbolic Radon transform represented as convolutions in log-polar coordinates

The hyperbolic Radon transform is a commonly used tool in seismic processing, for instance in seismic velocity analysis, data interpolation and for multiple removal. A direct implementation by summation of traces with different moveouts is computationally expensive for large data sets. In this paper we present a new method for fast computation of the hyperbolic Radon transforms. It is based on using a log-polar sampling with which the main computational parts reduce to computing convolutions. This allows for fast implementations by means of FFT. In addition to the FFT operations, interpolation procedures are required for switching between coordinates in the time-offset; Radon; and log-polar domains. Graphical Processor Units (GPUs) are suitable to use as a computational platform for this purpose, due to the hardware supported interpolation routines as well as optimized routines for FFT. Performance tests show large speed-ups of the proposed algorithm. Hence, it is suitable to use in iterative methods, and we provide examples for data interpolation and multiple removal using this approach.Comment: 21 pages, 10 figures, 2 table

Four-dimensional tomographic reconstruction by time domain decomposition

Since the beginnings of tomography, the requirement that the sample does not change during the acquisition of one tomographic rotation is unchanged. We derived and successfully implemented a tomographic reconstruction method which relaxes this decades-old requirement of static samples. In the presented method, dynamic tomographic data sets are decomposed in the temporal domain using basis functions and deploying an L1 regularization technique where the penalty factor is taken for spatial and temporal derivatives. We implemented the iterative algorithm for solving the regularization problem on modern GPU systems to demonstrate its practical use

Fourier-Based Forward and Back-Projectors in Iterative Fan-Beam Tomographic Image Reconstruction

Fourier-based forward and back-projection methods can reduce computation in iterative tomographic image reconstruction. Recently, an optimized nonuniform fast Fourier transform (NUFFT) approach was shown to yield accurate parallel-beam projections. In this paper, we extend the NUFFT approach to describe an O(N2 log N) projector/backprojector pair for fan-beam transmission tomography. Simulations and experiments with real CT data show that fan-beam Fourier-based forward and back-projection methods can reduce computation for iterative reconstruction while still providing accuracy comparable to their O(N3) space-based counterparts.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/86013/1/Fessler45.pd

Image Reconstruction Techniques and Measure of Quality: Classical vs.Modern Approaches

Mathematical methods are of central importance in the new technologies of image reconstruction. Some of the most important procedures are classified as Back-projection, Filtered Back-projection and iterative reconstruction techniques. Back- projection played an important historical role but is no longer used because of sizable artifacts. Analytical methods like Filtered Back projection excel in speed and accuracy when a large number ofprojections are available. These are extensively used in x-ray imaging. Algebraic Reconstruction Technique(ART) is more attractive when the number of views is limited and when noise is significant. For these reasons, iterative methods are widely used in imaging. Two slight variants of ART are SIRT (Simultaneous Iterative reconstruction Techniques) and SART (Simultaneous ART).A modern method of image reconstruction technique is Fast Slant Slack(FSS). This method is rapidly computable, algebraically exact, geometrically faithful and invertible. A new software known as beamlab is used for FSS image reconstruction. All these reconstruction techniques are explored in this work. Also, various tasks are performed to measure the immunity to noise and quality of the images using PSNR, MSE and Universal Image Quality Index

Signal processing with Fourier analysis, novel algorithms and applications

Fourier analysis is the study of the way general functions may be represented or approximated by sums of simpler trigonometric functions, also analogously known as sinusoidal modeling. The original idea of Fourier had a profound impact on mathematical analysis, physics and engineering because it diagonalizes time-invariant convolution operators. In the past signal processing was a topic that stayed almost exclusively in electrical engineering, where only the experts could cancel noise, compress and reconstruct signals. Nowadays it is almost ubiquitous, as everyone now deals with modern digital signals. Medical imaging, wireless communications and power systems of the future will experience more data processing conditions and wider range of applications requirements than the systems of today. Such systems will require more powerful, efficient and flexible signal processing algorithms that are well designed to handle such needs. No matter how advanced our hardware technology becomes we will still need intelligent and efficient algorithms to address the growing demands in signal processing. In this thesis, we investigate novel techniques to solve a suite of four fundamental problems in signal processing that have a wide range of applications. The relevant equations, literature of signal processing applications, analysis and final numerical algorithms/methods to solve them using Fourier analysis are discussed for different applications in the electrical engineering/computer science. The first four chapters cover the following topics of central importance in the field of signal processing: • Fast Phasor Estimation using Adaptive Signal Processing (Chapter 2) • Frequency Estimation from Nonuniform Samples (Chapter 3) • 2D Polar and 3D Spherical Polar Nonuniform Discrete Fourier Transform (Chapter 4) • Robust 3D registration using Spherical Polar Discrete Fourier Transform and Spherical Harmonics (Chapter 5) Even though each of these four methods discussed may seem completely disparate, the underlying motivation for more efficient processing by exploiting the Fourier domain signal structure remains the same. The main contribution of this thesis is the innovation in the analysis, synthesis, discretization of certain well known problems like phasor estimation, frequency estimation, computations of a particular non-uniform Fourier transform and signal registration on the transformed domain. We conduct propositions and evaluations of certain applications relevant algorithms such as, frequency estimation algorithm using non-uniform sampling, polar and spherical polar Fourier transform. The techniques proposed are also useful in the field of computer vision and medical imaging. From a practical perspective, the proposed algorithms are shown to improve the existing solutions in the respective fields where they are applied/evaluated. The formulation and final proposition is shown to have a variety of benefits. Future work with potentials in medical imaging, directional wavelets, volume rendering, video/3D object classifications, high dimensional registration are also discussed in the final chapter. Finally, in the spirit of reproducible research we release the implementation of these algorithms to the public using Github