4,360 research outputs found
Evaluation of a Tree-based Pipeline Optimization Tool for Automating Data Science
As the field of data science continues to grow, there will be an
ever-increasing demand for tools that make machine learning accessible to
non-experts. In this paper, we introduce the concept of tree-based pipeline
optimization for automating one of the most tedious parts of machine
learning---pipeline design. We implement an open source Tree-based Pipeline
Optimization Tool (TPOT) in Python and demonstrate its effectiveness on a
series of simulated and real-world benchmark data sets. In particular, we show
that TPOT can design machine learning pipelines that provide a significant
improvement over a basic machine learning analysis while requiring little to no
input nor prior knowledge from the user. We also address the tendency for TPOT
to design overly complex pipelines by integrating Pareto optimization, which
produces compact pipelines without sacrificing classification accuracy. As
such, this work represents an important step toward fully automating machine
learning pipeline design.Comment: 8 pages, 5 figures, preprint to appear in GECCO 2016, edits not yet
made from reviewer comment
Automating biomedical data science through tree-based pipeline optimization
Over the past decade, data science and machine learning has grown from a
mysterious art form to a staple tool across a variety of fields in academia,
business, and government. In this paper, we introduce the concept of tree-based
pipeline optimization for automating one of the most tedious parts of machine
learning---pipeline design. We implement a Tree-based Pipeline Optimization
Tool (TPOT) and demonstrate its effectiveness on a series of simulated and
real-world genetic data sets. In particular, we show that TPOT can build
machine learning pipelines that achieve competitive classification accuracy and
discover novel pipeline operators---such as synthetic feature
constructors---that significantly improve classification accuracy on these data
sets. We also highlight the current challenges to pipeline optimization, such
as the tendency to produce pipelines that overfit the data, and suggest future
research paths to overcome these challenges. As such, this work represents an
early step toward fully automating machine learning pipeline design.Comment: 16 pages, 5 figures, to appear in EvoBIO 2016 proceeding
A System for Accessible Artificial Intelligence
While artificial intelligence (AI) has become widespread, many commercial AI
systems are not yet accessible to individual researchers nor the general public
due to the deep knowledge of the systems required to use them. We believe that
AI has matured to the point where it should be an accessible technology for
everyone. We present an ongoing project whose ultimate goal is to deliver an
open source, user-friendly AI system that is specialized for machine learning
analysis of complex data in the biomedical and health care domains. We discuss
how genetic programming can aid in this endeavor, and highlight specific
examples where genetic programming has automated machine learning analyses in
previous projects.Comment: 14 pages, 5 figures, submitted to Genetic Programming Theory and
Practice 2017 worksho
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