Enumerating Polytropes

Polytropes are both ordinary and tropical polytopes. We show that tropical types of polytropes in $\mathbb{TP}^{n-1}$ are in bijection with cones of a certain Gr\"{o}bner fan $\mathcal{GF}_n$ in $\mathbb{R}^{n^2 - n}$ restricted to a small cone called the polytrope region. These in turn are indexed by compatible sets of bipartite and triangle binomials. Geometrically, on the polytrope region, $\mathcal{GF}_n$ is the refinement of two fans: the fan of linearity of the polytrope map appeared in \cite{tran.combi}, and the bipartite binomial fan. This gives two algorithms for enumerating tropical types of polytropes: one via a general Gr\"obner fan software such as \textsf{gfan}, and another via checking compatibility of systems of bipartite and triangle binomials. We use these algorithms to compute types of full-dimensional polytropes for $n = 4$, and maximal polytropes for $n = 5$.Comment: Improved exposition, fixed error in reporting the number maximal polytropes for $n = 6$, fixed error in definition of bipartite binomial

Enumerating fundamental normal surfaces: Algorithms, experiments and invariants

Computational knot theory and 3-manifold topology have seen significant breakthroughs in recent years, despite the fact that many key algorithms have complexity bounds that are exponential or greater. In this setting, experimentation is essential for understanding the limits of practicality, as well as for gauging the relative merits of competing algorithms. In this paper we focus on normal surface theory, a key tool that appears throughout low-dimensional topology. Stepping beyond the well-studied problem of computing vertex normal surfaces (essentially extreme rays of a polyhedral cone), we turn our attention to the more complex task of computing fundamental normal surfaces (essentially an integral basis for such a cone). We develop, implement and experimentally compare a primal and a dual algorithm, both of which combine domain-specific techniques with classical Hilbert basis algorithms. Our experiments indicate that we can solve extremely large problems that were once though intractable. As a practical application of our techniques, we fill gaps from the KnotInfo database by computing 398 previously-unknown crosscap numbers of knots.Comment: 17 pages, 5 figures; v2: Stronger experimental focus, restrict attention to primal & dual algorithms only, larger and more detailed experiments, more new crosscap number