40 research outputs found

    Uncertainty quantification for Bayesian nonparametric estimators of rare species variety

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    A hybrid sampler for Poisson-Kingman mixture models

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    This paper concerns the introduction of a new Markov Chain Monte Carlo scheme for posterior sampling in Bayesian nonparametric mixture models with priors that belong to the general Poisson-Kingman class. We present a novel compact way of representing the infinite dimensional component of the model such that while explicitly representing this infinite component it has less memory and storage requirements than previous MCMC schemes. We describe comparative simulation results demonstrating the efficacy of the proposed MCMC algorithm against existing marginal and conditional MCMC samplers

    Estimation of Hierarchical Archimedean Copulas as a Shortest Path Problem

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    We formulate the problem of finding and estimating the optimal hierarchical Archimedean copula as an amended shortest path problem. The standard network flow problem is amended by certain constraints specific to copulas, which limit scalability of the problem. However, we show in dimensions as high as twenty that the new approach dominates the alternatives which usually require recursive estimation or full enumeration

    On approximating copulas by finite mixtures

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    Copulas are now frequently used to approximate or estimate multivariate distributions because of their ability to take into account the multivariate dependence of the variables while controlling the approximation properties of the marginal densities. Copula based multivariate models can often also be more parsimonious than fitting a flexible multivariate model, such as a mixture of normals model, directly to the data. However, to be effective, it is imperative that the family of copula models considered is sufficiently flexible. Although finite mixtures of copulas have been used to construct flexible families of copulas, their approximation properties are not well understood and we show that natural candidates such as mixtures of elliptical copulas and mixtures of Archimedean copulas cannot approximate a general copula arbitrarily well. Our article develops fundamental tools for approximating a general copula arbitrarily well by a mixture and proposes a family of finite mixtures that can do so. We illustrate empirically on a financial data set that our approach for estimating a copula can be much more parsimonious and results in a better fit than approximating the copula by a mixture of normal copulas.Comment: 26 pages and 1 figure and 2 table

    Approximating predictive probabilities of Gibbs-type priors

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    Gibbs-type random probability measures, or Gibbs-type priors, are arguably the most "natural" generalization of the celebrated Dirichlet prior. Among them the two parameter Poisson-Dirichlet prior certainly stands out for the mathematical tractability and interpretability of its predictive probabilities, which made it the natural candidate in several applications. Given a sample of size nn, in this paper we show that the predictive probabilities of any Gibbs-type prior admit a large nn approximation, with an error term vanishing as o(1/n)o(1/n), which maintains the same desirable features as the predictive probabilities of the two parameter Poisson-Dirichlet prior.Comment: 22 pages, 6 figures. Added posterior simulation study, corrected typo

    Nonparametric estimation of the tree structure of a nested Archimedean copula

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    One of the features inherent in nested Archimedean copulas, also called hierarchical Archimedean copulas, is their rooted tree structure. A nonparametric, rank-based method to estimate this structure is presented. The idea is to represent the target structure as a set of trivariate structures, each of which can be estimated individually with ease. Indeed, for any three variables there are only four possible rooted tree structures and, based on a sample, a choice can be made by performing comparisons between the three bivariate margins of the empirical distribution of the three variables. The set of estimated trivariate structures can then be used to build an estimate of the target structure. The advantage of this estimation method is that it does not require any parametric assumptions concerning the generator functions at the nodes of the tree.Comment: 25 pages, 9 figure
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