Probabilistic Label Relation Graphs with Ising Models

We consider classification problems in which the label space has structure. A common example is hierarchical label spaces, corresponding to the case where one label subsumes another (e.g., animal subsumes dog). But labels can also be mutually exclusive (e.g., dog vs cat) or unrelated (e.g., furry, carnivore). To jointly model hierarchy and exclusion relations, the notion of a HEX (hierarchy and exclusion) graph was introduced in [7]. This combined a conditional random field (CRF) with a deep neural network (DNN), resulting in state of the art results when applied to visual object classification problems where the training labels were drawn from different levels of the ImageNet hierarchy (e.g., an image might be labeled with the basic level category "dog", rather than the more specific label "husky"). In this paper, we extend the HEX model to allow for soft or probabilistic relations between labels, which is useful when there is uncertainty about the relationship between two labels (e.g., an antelope is "sort of" furry, but not to the same degree as a grizzly bear). We call our new model pHEX, for probabilistic HEX. We show that the pHEX graph can be converted to an Ising model, which allows us to use existing off-the-shelf inference methods (in contrast to the HEX method, which needed specialized inference algorithms). Experimental results show significant improvements in a number of large-scale visual object classification tasks, outperforming the previous HEX model.Comment: International Conference on Computer Vision (2015

Kernel Belief Propagation

We propose a nonparametric generalization of belief propagation, Kernel Belief Propagation (KBP), for pairwise Markov random fields. Messages are represented as functions in a reproducing kernel Hilbert space (RKHS), and message updates are simple linear operations in the RKHS. KBP makes none of the assumptions commonly required in classical BP algorithms: the variables need not arise from a finite domain or a Gaussian distribution, nor must their relations take any particular parametric form. Rather, the relations between variables are represented implicitly, and are learned nonparametrically from training data. KBP has the advantage that it may be used on any domain where kernels are defined (Rd, strings, groups), even where explicit parametric models are not known, or closed form expressions for the BP updates do not exist. The computational cost of message updates in KBP is polynomial in the training data size. We also propose a constant time approximate message update procedure by representing messages using a small number of basis functions. In experiments, we apply KBP to image denoising, depth prediction from still images, and protein configuration prediction: KBP is faster than competing classical and nonparametric approaches (by orders of magnitude, in some cases), while providing significantly more accurate results

Estimation of a Covariance Matrix with Zeros

We consider estimation of the covariance matrix of a multivariate random vector under the constraint that certain covariances are zero. We first present an algorithm, which we call Iterative Conditional Fitting, for computing the maximum likelihood estimator of the constrained covariance matrix, under the assumption of multivariate normality. In contrast to previous approaches, this algorithm has guaranteed convergence properties. Dropping the assumption of multivariate normality, we show how to estimate the covariance matrix in an empirical likelihood approach. These approaches are then compared via simulation and on an example of gene expression.Comment: 25 page

High-Dimensional Dependency Structure Learning for Physical Processes

In this paper, we consider the use of structure learning methods for probabilistic graphical models to identify statistical dependencies in high-dimensional physical processes. Such processes are often synthetically characterized using PDEs (partial differential equations) and are observed in a variety of natural phenomena, including geoscience data capturing atmospheric and hydrological phenomena. Classical structure learning approaches such as the PC algorithm and variants are challenging to apply due to their high computational and sample requirements. Modern approaches, often based on sparse regression and variants, do come with finite sample guarantees, but are usually highly sensitive to the choice of hyper-parameters, e.g., parameter $\lambda$ for sparsity inducing constraint or regularization. In this paper, we present ACLIME-ADMM, an efficient two-step algorithm for adaptive structure learning, which estimates an edge specific parameter $\lambda_{ij}$ in the first step, and uses these parameters to learn the structure in the second step. Both steps of our algorithm use (inexact) ADMM to solve suitable linear programs, and all iterations can be done in closed form in an efficient block parallel manner. We compare ACLIME-ADMM with baselines on both synthetic data simulated by partial differential equations (PDEs) that model advection-diffusion processes, and real data (50 years) of daily global geopotential heights to study information flow in the atmosphere. ACLIME-ADMM is shown to be efficient, stable, and competitive, usually better than the baselines especially on difficult problems. On real data, ACLIME-ADMM recovers the underlying structure of global atmospheric circulation, including switches in wind directions at the equator and tropics entirely from the data.Comment: 21 pages, 8 figures, International Conference on Data Mining 201

Training Dynamic Exponential Family Models with Causal and Lateral Dependencies for Generalized Neuromorphic Computing

Neuromorphic hardware platforms, such as Intel's Loihi chip, support the implementation of Spiking Neural Networks (SNNs) as an energy-efficient alternative to Artificial Neural Networks (ANNs). SNNs are networks of neurons with internal analogue dynamics that communicate by means of binary time series. In this work, a probabilistic model is introduced for a generalized set-up in which the synaptic time series can take values in an arbitrary alphabet and are characterized by both causal and instantaneous statistical dependencies. The model, which can be considered as an extension of exponential family harmoniums to time series, is introduced by means of a hybrid directed-undirected graphical representation. Furthermore, distributed learning rules are derived for Maximum Likelihood and Bayesian criteria under the assumption of fully observed time series in the training set.Comment: Published in IEEE ICASSP 2019. Author's Accepted Manuscrip