Making distributed computing infrastructures interoperable and accessible for e-scientists at the level of computational workflows

As distributed computing infrastructures evolve, and as their take up by user communities is growing, the importance of making different types of infrastructures based on a heterogeneous set of middleware interoperable is becoming crucial. This PhD submission, based on twenty scientific publications, presents a unique solution to the challenge of the seamless interoperation of distributed computing infrastructures at the level of workflows. The submission investigates workflow level interoperation inside a particular workflow system (intra-workflow interoperation), and also between different workflow solutions (inter-workflow interoperation). In both cases the interoperation of workflow component execution and the feeding of data into these components workflow components are considered. The invented and developed framework enables the execution of legacy applications and grid jobs and services on multiple grid systems, the feeding of data from heterogeneous file and data storage solutions to these workflow components, and the embedding of non-native workflows to a hosting meta-workflow. Moreover, the solution provides a high level user interface that enables e-scientist end-users to conveniently access the interoperable grid solutions without requiring them to study or understand the technical details of the underlying infrastructure. The candidate has also developed an application porting methodology that enables the systematic porting of applications to interoperable and interconnected grid infrastructures, and facilitates the exploitation of the above technical framework

A tutorial task and tertiary courseware model for collaborative learning communities

RAED provides a computerised infrastructure to support the development and administration of Vicarious Learning in collaborative learning communities spread across multiple universities and workplaces. The system is based on the OASIS middleware for Role-based Access Control. This paper describes the origins of the model and the approach to implementation and outlines some of its benefits to collaborative teachers and learners

Composable M&S web services for net-centric applications

Service-oriented architectures promise easier integration of functionality in the form of web services into operational systems than is the case with interface-driven system-oriented approaches. Although the Extensible Markup Language (XML) enables a new level of interoperability among heterogeneous systems, XML alone does not solve all interoperability problems users contend with when integrating services into operational systems. To manage the basic challenges of service interoperation, we developed the Levels of Conceptual Interoperability Model (LCIM) to enable a layered approach and gradual solution improvements. Furthermore, we developed methods of model-based data engineering (MBDE) for semantically consistent service integration as a first step. These methods have been applied in the U.S. in collaboration with industry resulting in proofs of concepts. The results are directly applicable in a net-centric and net-enabled environment

CITIDEL Collection Building

The aim of this study is to facilitate the goals of the Computing and Information Technology Interactive Digital Educational Library (CITIDEL) by increasing the number of collections available to it. This study will help in achieving this goal by focusing on four diverse collections

BlogForever D3.2: Interoperability Prospects

This report evaluates the interoperability prospects of the BlogForever platform. Therefore, existing interoperability models are reviewed, a Delphi study to identify crucial aspects for the interoperability of web archives and digital libraries is conducted, technical interoperability standards and protocols are reviewed regarding their relevance for BlogForever, a simple approach to consider interoperability in specific usage scenarios is proposed, and a tangible approach to develop a succession plan that would allow a reliable transfer of content from the current digital archive to other digital repositories is presented

Forum Session at the First International Conference on Service Oriented Computing (ICSOC03)

The First International Conference on Service Oriented Computing (ICSOC) was held in Trento, December 15-18, 2003. The focus of the conference ---Service Oriented Computing (SOC)--- is the new emerging paradigm for distributed computing and e-business processing that has evolved from object-oriented and component computing to enable building agile networks of collaborating business applications distributed within and across organizational boundaries. Of the 181 papers submitted to the ICSOC conference, 10 were selected for the forum session which took place on December the 16th, 2003. The papers were chosen based on their technical quality, originality, relevance to SOC and for their nature of being best suited for a poster presentation or a demonstration. This technical report contains the 10 papers presented during the forum session at the ICSOC conference. In particular, the last two papers in the report ere submitted as industrial papers

The Impact of the Internet on Telecommunication Architectures

The ever-growing popularity of the Internet is dramatically changing the landscape of the communications market place. The two separate worlds of the Internet and Telecommunications are converging. The respective advantages of the two environments are being integrated to fulfill the promise of the information super-highways. In this paper, we examine the impact of the Internet on the main telecommunication architectures, namely the IN, the TMN and TINA. There are two new tendencies for implementing telephony services in combination with the Internet: running part of the control sys tem over the Internet, or conveying both the user data and the control information over the Internet. We examine these two trends, and elaborate on possible ways of salvaging the best parts of the work achieved by the TINA-Consortium in the Internet context

Ontology-based Knowledge Representation for Protein Data

The advances in information and communication technologies coupled with increased knowledge about genes and proteins have opened new perspectives for study of protein complexes. There is a growing need to integrate the knowledge about various protein complexes for effective disease prevention mechanisms, individualized medicines and treatments and other accepts of healthcare. In this paper we propose a protein ontology that handles the following computational challenges in the area proteomics and systems biology in general: (1) it provides more accurate interpretations and associations as conclusions are based on data and semantics. (2) It makes it possible to study relationships among proteins, protein folding, behaviour of protein under various environments, and most importantly cellular function of protein. This protein ontology is a unified terminology description integrating various protein database schemas and provides a easier way to predict and understand proteins