Bibliographic Analysis on Research Publications using Authors, Categorical Labels and the Citation Network

Bibliographic analysis considers the author's research areas, the citation network and the paper content among other things. In this paper, we combine these three in a topic model that produces a bibliographic model of authors, topics and documents, using a nonparametric extension of a combination of the Poisson mixed-topic link model and the author-topic model. This gives rise to the Citation Network Topic Model (CNTM). We propose a novel and efficient inference algorithm for the CNTM to explore subsets of research publications from CiteSeerX. The publication datasets are organised into three corpora, totalling to about 168k publications with about 62k authors. The queried datasets are made available online. In three publicly available corpora in addition to the queried datasets, our proposed model demonstrates an improved performance in both model fitting and document clustering, compared to several baselines. Moreover, our model allows extraction of additional useful knowledge from the corpora, such as the visualisation of the author-topics network. Additionally, we propose a simple method to incorporate supervision into topic modelling to achieve further improvement on the clustering task.Comment: Preprint for Journal Machine Learnin

Joint Modeling of Topics, Citations, and Topical Authority in Academic Corpora

Much of scientific progress stems from previously published findings, but searching through the vast sea of scientific publications is difficult. We often rely on metrics of scholarly authority to find the prominent authors but these authority indices do not differentiate authority based on research topics. We present Latent Topical-Authority Indexing (LTAI) for jointly modeling the topics, citations, and topical authority in a corpus of academic papers. Compared to previous models, LTAI differs in two main aspects. First, it explicitly models the generative process of the citations, rather than treating the citations as given. Second, it models each author's influence on citations of a paper based on the topics of the cited papers, as well as the citing papers. We fit LTAI to four academic corpora: CORA, Arxiv Physics, PNAS, and Citeseer. We compare the performance of LTAI against various baselines, starting with the latent Dirichlet allocation, to the more advanced models including author-link topic model and dynamic author citation topic model. The results show that LTAI achieves improved accuracy over other similar models when predicting words, citations and authors of publications.Comment: Accepted by Transactions of the Association for Computational Linguistics (TACL); to appea

Using Text Similarity to Detect Social Interactions not Captured by Formal Reply Mechanisms

In modeling social interaction online, it is important to understand when people are reacting to each other. Many systems have explicit indicators of replies, such as threading in discussion forums or replies and retweets in Twitter. However, it is likely these explicit indicators capture only part of people's reactions to each other, thus, computational social science approaches that use them to infer relationships or influence are likely to miss the mark. This paper explores the problem of detecting non-explicit responses, presenting a new approach that uses tf-idf similarity between a user's own tweets and recent tweets by people they follow. Based on a month's worth of posting data from 449 ego networks in Twitter, this method demonstrates that it is likely that at least 11% of reactions are not captured by the explicit reply and retweet mechanisms. Further, these uncaptured reactions are not evenly distributed between users: some users, who create replies and retweets without using the official interface mechanisms, are much more responsive to followees than they appear. This suggests that detecting non-explicit responses is an important consideration in mitigating biases and building more accurate models when using these markers to study social interaction and information diffusion.Comment: A final version of this work was published in the 2015 IEEE 11th International Conference on e-Science (e-Science

Transforming Graph Representations for Statistical Relational Learning

Relational data representations have become an increasingly important topic due to the recent proliferation of network datasets (e.g., social, biological, information networks) and a corresponding increase in the application of statistical relational learning (SRL) algorithms to these domains. In this article, we examine a range of representation issues for graph-based relational data. Since the choice of relational data representation for the nodes, links, and features can dramatically affect the capabilities of SRL algorithms, we survey approaches and opportunities for relational representation transformation designed to improve the performance of these algorithms. This leads us to introduce an intuitive taxonomy for data representation transformations in relational domains that incorporates link transformation and node transformation as symmetric representation tasks. In particular, the transformation tasks for both nodes and links include (i) predicting their existence, (ii) predicting their label or type, (iii) estimating their weight or importance, and (iv) systematically constructing their relevant features. We motivate our taxonomy through detailed examples and use it to survey and compare competing approaches for each of these tasks. We also discuss general conditions for transforming links, nodes, and features. Finally, we highlight challenges that remain to be addressed