On fractional realizations of graph degree sequences

We introduce fractional realizations of a graph degree sequence and a closely associated convex polytope. Simple graph realizations correspond to a subset of the vertices of this polytope. We describe properties of the polytope vertices and characterize degree sequences for which each polytope vertex corresponds to a simple graph realization. These include the degree sequences of pseudo-split graphs, and we characterize their realizations both in terms of forbidden subgraphs and graph structure.Comment: 18 pages, 4 figure

Upward-closed hereditary families in the dominance order

The majorization relation orders the degree sequences of simple graphs into posets called dominance orders. As shown by Hammer et al. and Merris, the degree sequences of threshold and split graphs form upward-closed sets within the dominance orders they belong to, i.e., any degree sequence majorizing a split or threshold sequence must itself be split or threshold, respectively. Motivated by the fact that threshold graphs and split graphs have characterizations in terms of forbidden induced subgraphs, we define a class $\mathcal{F}$ of graphs to be dominance monotone if whenever no realization of $e$ contains an element $\mathcal{F}$ as an induced subgraph, and $d$ majorizes $e$, then no realization of $d$ induces an element of $\mathcal{F}$. We present conditions necessary for a set of graphs to be dominance monotone, and we identify the dominance monotone sets of order at most 3.Comment: 15 pages, 6 figure

On the Number of Embeddings of Minimally Rigid Graphs

Rigid frameworks in some Euclidian space are embedded graphs having a unique local realization (up to Euclidian motions) for the given edge lengths, although globally they may have several. We study the number of distinct planar embeddings of minimally rigid graphs with $n$ vertices. We show that, modulo planar rigid motions, this number is at most ${{2n-4}\choose {n-2}} \approx 4^n$. We also exhibit several families which realize lower bounds of the order of $2^n$, $2.21^n$ and $2.88^n$. For the upper bound we use techniques from complex algebraic geometry, based on the (projective) Cayley-Menger variety $CM^{2,n}(C)\subset P_{{{n}\choose {2}}-1}(C)$ over the complex numbers $C$. In this context, point configurations are represented by coordinates given by squared distances between all pairs of points. Sectioning the variety with $2n-4$ hyperplanes yields at most $deg(CM^{2,n})$ zero-dimensional components, and one finds this degree to be $D^{2,n}={1/2}{{2n-4}\choose {n-2}}$. The lower bounds are related to inductive constructions of minimally rigid graphs via Henneberg sequences. The same approach works in higher dimensions. In particular we show that it leads to an upper bound of $2 D^{3,n}= {\frac{2^{n-3}}{n-2}}{{n-6}\choose{n-3}}$ for the number of spatial embeddings with generic edge lengths of the 1-skeleton of a simplicial polyhedron, up to rigid motions

Finding weakly reversible realizations of chemical reaction networks using optimization

An algorithm is given in this paper for the computation of dynamically equivalent weakly reversible realizations with the maximal number of reactions, for chemical reaction networks (CRNs) with mass action kinetics. The original problem statement can be traced back at least 30 years ago. The algorithm uses standard linear and mixed integer linear programming, and it is based on elementary graph theory and important former results on the dense realizations of CRNs. The proposed method is also capable of determining if no dynamically equivalent weakly reversible structure exists for a given reaction network with a previously fixed complex set.Comment: 18 pages, 9 figure

Lower bounds on the number of realizations of rigid graphs

Computing the number of realizations of a minimally rigid graph is a notoriously difficult problem. Towards this goal, for graphs that are minimally rigid in the plane, we take advantage of a recently published algorithm, which is the fastest available method, although its complexity is still exponential. Combining computational results with the theory of constructing new rigid graphs by gluing, we give a new lower bound on the maximal possible number of (complex) realizations for graphs with a given number of vertices. We extend these ideas to rigid graphs in three dimensions and we derive similar lower bounds, by exploiting data from extensive Gr\"obner basis computations