Explorations in anatomy: the remains from Royal London Hospital

This paper considers the faunal remains from recent excavations at the Royal London Hospital. The remains date to the beginning of the 19th century and offer an insight into the life of the hospital's patients and practices of the attached medical school. Many of the animal remains consist of partially dissected skeletons, including the unique finds of Hermann's tortoise (Testudo hermanni) and Cercopithecus monkey. The hospital diet and developments in comparative anatomy are discussed by integrating the results with documentary research. They show that zooarchaeological study of later post-medieval material can significantly enhance our understanding of the exploitation of animals in this perio

Physical Cranial Characters of Wajak Man

Human fossils from Wajak, or better known as Wajak Man which is noted as Wajak 1, have been discovered by von Rietschoten in 1888 during exploration prospecting activities at the marble mine area in Tulungagung. The Wajak 1 found in cave sediments during disorganized excavation, therefore the stratigraphic position of the fossil was uncertain. Until this time, since the discovery of the fossil, not many study and publications have been performed on the fossil of Wajak 1. For this reason, this research attempted to compare Wajak 1 with Homo erectus fossils from Ngandong, Sambungmacan, and Sangiran to understand the presence of a linearity pattern based on anatomy of the physical cranial characters. The research was conducted through qualitative analysis by comparing the anatomy of all samples, and quantitative analysis by measuring some biometric parameters of cranium which then processed by statistical methods. Based on PCA analysis, the fossils of Ng 9, Ng 10, Ng 11, Sm 1, Sm 3, Sm 4, Sn 17, Ngawi 1, and Wajak 1 have some kinship based on two principal components as a variable that mostly contributed. Particularly, the specimen of Wajak 1 has the furthermost kinship with other fossils based on maximum cranial length and minimum frontal breadth. Based on these parameters, the Wajak 1 has the largest size in comparison with other fossil samples. The fossil Ngawi 1 and Sm 3 have a close relationship because both of the samples have a smallest size among others, as indicated by their maximum cranial length, minimum frontal breadth, parietal chord, and occipital chord. The specimens of Ng 9, Ng 10, Ng 11 closed to one another and formed in one group, while Sm 1 and Sm 4 close to Sn 17 and form another group. Ng 9, Ng 10, and Ng 11 have a greater values on four parameters compared to the specimens Sm 1, Sm 4, and Sn 17. The result of cluster analysis shows the cluster pattern similar to PCA as shown in the dendrogram. Based on comparative anatomy, the Wajak 1 has most rounded shape and largest cranium. Another different could be seen visibly in the supraorbital torus which is thin and curve tends to follow the shape of orbital. A prominent supraorbital torus is a character belongs to Homo erectus was observed in the specimens Sm 1, Sm 4, Sn 17, Ng 9, Ng 10, Ng 11, Sm 3, and Ngawi 1, but it was not observed in Wajak 1. So, it could be concluded that Wajak 1 is belongs to Homo sapiens which has a characters no prominent supraorbital torus, most rounded form and largest size among other specimens. Keywords: Wajak Man/Wajak 1, comparative anatomy, Principal Component Analysis (PCA

Distal Urogenital Anatomy of Male Southern Coal Skinks, Plestiodon anthracinus pluvialis (Reptilia: Scincidae)

I investigated the morphology and histology of the distal urogenital anatomy of male southern coal skinks (Plestiodon anthracinus pluvialis) from reproductively active individuals collected in Arkansas in order to provide comparative information with recent studies on squamate urogenital anatomy. Specifically, I focused on the basic anatomy and positioning of posterior ducts in this skink, which included portions of the ductus deferens, the ampulla ductus deferentis, the sexual segment of the kidney, the ureter and collecting ducts, as well as aspects of the urodaeal chamber and urogenital papillae. I found a much reduced ampulla ductus deferentis comprising only 0.7 mm in length in the caudal region of the ductus deferens. The sexual segment of the kidney was well developed, being located in collecting ducts of the kidney proper, in walls of collecting ducts leading away from the kidney as well as within anterior portions of the ureter. The anterior dorsal recess of the urodaeum possessed epithelial crypts within a highly folded epithelium. Finally, a ductal triad (ductus deferens, ureter, and a single collecting duct) terminates at each orifice of the paired urogenital papillae. The distal urogenital anatomy of this scincid lizard revealed anatomical features similar to other species within the genus Plestiodon

Digital dissection of the model organism Xenopus laevis using contrast-enhanced computed tomography

The African clawed frog, Xenopus laevis, is one of the most widely used model organisms in biological research. However, the most recent anatomical description of X. laevis was produced nearly a century ago. Compared with other anurans, pipid frogs – including X. laevis – exhibit numerous unusual morphological features; thus, anatomical descriptions of more ‘typical’ frogs do not detail many aspects of X. laevis skeletal and soft‐tissue morphology. The relatively new method of using iodine‐based agents to stain soft tissues prior to high‐resolution X‐ray imaging has several advantages over gross dissection, such as enabling dissection of very small and fragile specimens, and preserving the three‐dimensional topology of anatomical structures. Here, we use contrast‐enhanced computed tomography to produce a high‐resolution three‐dimensional digital dissection of a post‐metamorphic X. laevis to successfully visualize: skeletal and muscular anatomy; the nervous, respiratory, digestive, excretory and reproductive systems; and the major sense organs. Our digital dissection updates and supplements previous anatomical descriptions of this key model organism, and we present the three‐dimensional data as interactive portable document format (PDF) files that are easily accessible and freely available for research and educational purposes. The data presented here hold enormous potential for applications beyond descriptive purposes, particularly for biological researchers using this taxon as a model organism, comparative anatomy and biomechanical modelling

An evaluation of the performance of three semantic background knowledge sources in comparative anatomy

In this paper we evaluate the performance and usefulness of three semantic background knowledge sources for predicting synonymous anatomical terms across species boundaries. The reference sources under evaluation are UMLS, FMA-OBO and WordNet, which are applied to the anatomical ontologies of mouse and zebrafish. Our results show that the use of specialized knowledge sources leads to highly accurate predictions, verified through complete manual curation, which can be further improved by combining multiple of said sources. We argue that these three references complement each other in terms of granularity and specificity. From our results we conclude that these references can be used to create reliable ontology mappings with minimal human supervision

Embryology and Evolution

The proofs of evolution must be sought in the entire field of science. Direct proof is found in the study of Morphology, whose bases are comparative anatomy; embryology; in the study of paleontology, of geology, of geographical distribution, in the study of nature and experiments of today. In this vast field of direct proofs of evolution it is our purpose to present some of the evidences of evolution as furnished by one of these, namely, Comparative Embryology

Functional anatomy of the middle and inner ears of the red fox, in comparison to domestic dogs and cats

Anatomical middle and inner ear parameters are often used to predict hearing sensitivities of mammalian species. Given that ear morphology is substantially affected both by phylogeny and body size, it is interesting to consider whether the relatively small anatomical differences expected in related species of similar size have a noticeable impact on hearing. We present a detailed anatomical description of the middle and inner ears of the red fox Vulpes vulpes, a widespread, wild carnivore for which a behavioural audiogram is available. We compare fox ears to those of the well‐studied and similarly sized domestic dog and cat, taking data for dogs and cats from the literature as well as providing new measurements of basilar membrane (BM) length and hair cell numbers and densities in these animals. Our results show that the middle ear of the red fox is very similar to that of dogs. The most obvious difference from that of the cat is the lack of a fully formed bony septum in the bulla tympanica of the fox. The cochlear structures of the fox, however, are very like those of the cat, whereas dogs have a broader BM in the basal cochlea. We further report that the mass of the middle ear ossicles and the bulla volume increase with age in foxes. Overall, the ear structures of foxes, dogs and cats are anatomically very similar, and their behavioural audiograms overlap. However, the results of several published models and correlations that use middle and inner ear measurements to predict aspects of hearing were not always found to match well with audiogram data, especially when it came to the sharper tuning in the fox audiogram. This highlights that, although there is evidently a broad correspondence between structure and function, it is not always possible to draw direct links when considering more subtle differences between related species

Structure, ontogeny and evolution of the patellar tendon in emus (Dromaius novaehollandiae) and other palaeognath birds

The patella (kneecap) exhibits multiple evolutionary origins in birds, mammals, and lizards, and is thought to increase the mechanical advantage of the knee extensor muscles. Despite appreciable interest in the specialized anatomy and locomotion of palaeognathous birds (ratites and relatives), the structure, ontogeny and evolution of the patella in these species remains poorly characterized. Within Palaeognathae, the patella has been reported to be either present, absent, or fused with other bones, but it is unclear how much of this variation is real, erroneous or ontogenetic. Clarification of the patella’s form in palaeognaths would provide insight into the early evolution of the patella in birds, in addition to the specialized locomotion of these species. Findings would also provide new character data of use in resolving the controversial evolutionary relationships of palaeognaths. In this study, we examined the gross and histological anatomy of the emu patellar tendon across several age groups from five weeks to 18 months. We combined these results with our observations and those of others regarding the patella in palaeognaths and their outgroups (both extant and extinct), to reconstruct the evolution of the patella in birds. We found no evidence of an ossified patella in emus, but noted its tendon to have a highly unusual morphology comprising large volumes of adipose tissue contained within a collagenous meshwork. The emu patellar tendon also included increasing amounts of a cartilage-like tissue throughout ontogeny. We speculate that the unusual morphology of the patellar tendon in emus results from assimilation of a peri-articular fat pad, and metaplastic formation of cartilage, both potentially as adaptations to increasing tendon load. We corroborate previous observations of a ‘double patella’ in ostriches, but in contrast to some assertions, we find independent (i.e., unfused) ossified patellae in kiwis and tinamous. Our reconstructions suggest a single evolutionary origin of the patella in birds and that the ancestral patella is likely to have been a composite structure comprising a small ossified portion, lost by some species (e.g., emus, moa) but expanded in others (e.g., ostriches)

Morphometric and statistical analysis of the palmaris longus muscle in human and non-human primates

The palmaris longus is considered a phylogenetic degenerate metacarpophalangeal joint flexor muscle in humans, a small vestigial forearm muscle; it is the most variable muscle in humans, showing variation in position, duplication, slips and could be reverted. It is frequently studied in papers about human anatomical variations in cadavers and in vivo, its variation has importance in medical clinic, surgery, radiological analysis, in studies about high-performance athletes, in genetics and anthropologic studies.Most studies about palmaris longus in humans are associated to frequency or case studies, but comparative anatomy in primates and comparative morphometry were not found in scientific literature. Comparative anatomy associated to morphometry of palmaris longus could explain the degeneration observed in this muscle in two of three of the great apes. Hypothetically, the comparison of the relative length of tendons and belly could indicate the pathway of the degeneration of this muscle, that is, the degeneration could be associated to increased tendon length and decreased belly from more primitive primates to those most derivate, that is, great apes to modern humans. In conclusion, in primates, the tendon of the palmaris longus increase fromLemuriformes tomodern humans, that is, from arboreal to terrestrial primates and the muscle became weaker and tending to be missing