Combining Differential Kinematics and Optical Flow for Automatic Labeling of Continuum Robots in Minimally Invasive Surgery

International audienceThe segmentation of continuum robots in medical images can be of interest for analyzing surgical procedures or for controlling them. However, the automatic segmentation of continuous and flexible shapes is not an easy task. On one hand conventional approaches are not adapted to the specificities of these instruments, such as imprecise kinematic models, and on the other hand techniques based on deep-learning showed interesting capabilities but need many manually labeled images. In this article we propose a novel approach for segmenting continuum robots on endoscopic images, which requires no prior on the instrument visual appearance and no manual annotation of images. The method relies on the use of the combination of kinematic models and differential kinematic models of the robot and the analysis of optical flow in the images. A cost function aggregating information from the acquired image, from optical flow and from robot encoders is optimized using particle swarm optimization and provides estimated parameters of the pose of the continuum instrument and a mask defining the instrument in the image. In addition a temporal consistency is assessed in order to improve stochastic optimization and reject outliers. The proposed approach has been tested for the robotic instruments of a flexible endoscopy platform both for benchtop acquisitions and an in vivo video. The results show the ability of the technique to correctly segment the instruments without a prior, and in challenging conditions. The obtained segmentation can be used for several applications, for instance for providing automatic labels for machine learning techniques

Challenges of continuum robots in clinical context: a review

With the maturity of surgical robotic systems based on traditional rigid-link principles, the rate of progress slowed as limits of size and controllable degrees of freedom were reached. Continuum robots came with the potential to deliver a step change in the next generation of medical devices, by providing better access, safer interactions and making new procedures possible. Over the last few years, several continuum robotic systems have been launched commercially and have been increasingly adopted in hospitals. Despite the clear progress achieved, continuum robots still suffer from design complexity hindering their dexterity and scalability. Recent advances in actuation methods have looked to address this issue, offering alternatives to commonly employed approaches. Additionally, continuum structures introduce significant complexity in modelling, sensing, control and fabrication; topics which are of particular focus in the robotics community. It is, therefore, the aim of the presented work to highlight the pertinent areas of active research and to discuss the challenges to be addressed before the potential of continuum robots as medical devices may be fully realised

Characterisation and State Estimation of Magnetic Soft Continuum Robots

Minimally invasive surgery has become more popular as it leads to less bleeding, scarring, pain, and shorter recovery time. However, this has come with counter-intuitive devices and steep surgeon learning curves. Magnetically actuated Soft Continuum Robots (SCR) have the potential to replace these devices, providing high dexterity together with the ability to conform to complex environments and safe human interactions without the cognitive burden for the clinician. Despite considerable progress in the past decade in their development, several challenges still plague SCR hindering their full realisation. This thesis aims at improving magnetically actuated SCR by addressing some of these challenges, such as material characterisation and modelling, and sensing feedback and localisation. Material characterisation for SCR is essential for understanding their behaviour and designing effective modelling and simulation strategies. In this work, the material properties of commonly employed materials in magnetically actuated SCR, such as elastic modulus, hyper-elastic model parameters, and magnetic moment were determined. Additionally, the effect these parameters have on modelling and simulating these devices was investigated. Due to the nature of magnetic actuation, localisation is of utmost importance to ensure accurate control and delivery of functionality. As such, two localisation strategies for magnetically actuated SCR were developed, one capable of estimating the full 6 degrees of freedom (DOFs) pose without any prior pose information, and another capable of accurately tracking the full 6-DOFs in real-time with positional errors lower than 4~mm. These will contribute to the development of autonomous navigation and closed-loop control of magnetically actuated SCR

Using High-Level Processing of Low-Level Signals to Actively Assist Surgeons with Intelligent Surgical Robots

Robotic surgical systems are increasingly used for minimally-invasive surgeries. As such, there is opportunity for these systems to fundamentally change the way surgeries are performed by becoming intelligent assistants rather than simply acting as the extension of surgeons' arms. As a step towards intelligent assistance, this thesis looks at ways to represent different aspects of robot-assisted surgery (RAS). We identify three main components: the robot, the surgeon actions, and the patient scene dynamics. Traditional learning algorithms in these domains are predominantly supervised methods. This has several drawbacks. First many of these domains are non-categorical, like how soft-tissue deforms. This makes labeling difficult. Second, surgeries vary greatly. Estimation of the robot state may be affected by how the robot is docked and cable tensions in the instruments. Estimation of the patient anatomy and its dynamics are often inaccurate, and in any case, may change throughout a surgery. To obtain the most accurate information, these aspects must be learned during the procedure. This limits the amount of labeling that could be done. On the surgeon side, different surgeons may perform the same procedure differently and the algorithm should provide personalized estimations for surgeons. All of these considerations motivated the use of self-supervised learning throughout this thesis. We first build a representation of the robot system. In particular, we looked at learning the dynamics model of the robot. We evaluate the model by using it to estimate forces. Once we can estimate forces in free space, we extend the algorithm to take into account patient-specific interactions, namely with the trocar and the cannula seal. Accounting for surgery-specific interactions is possible because our method does not require additional sensors and can be trained in less than five minutes, including time for data collection. Next, we use cross-modal training to understand surgeon actions by looking at the bottleneck layer when mapping video to kinematics. This should contain information about the latent space of surgeon-actions, while discarding some medium-specific information about either the video or the kinematics. Lastly, to understand the patient scene, we start with modeling interactions between a robot instrument and a soft-tissue phantom. Models are often inaccurate due to imprecise material parameters and boundary conditions, particularly in clinical scenarios. Therefore, we add a depth camera to observe deformations to correct the results of simulations. We also introduce a network that learns to simulate soft-tissue deformation from physics simulators in order to speed up the estimation. We demonstrate that self-supervised learning can be used for understanding each part of RAS. The representations it learns contain information about signals that are not directly measurable. The self-supervised nature of the methods presented in this thesis lends itself well to learning throughout a surgery. With such frameworks, we can overcome some of the main barriers to adopting learning methods in the operating room: the variety in surgery and the difficulty in labeling enough training data for each case

Augmented Reality

Augmented Reality (AR) is a natural development from virtual reality (VR), which was developed several decades earlier. AR complements VR in many ways. Due to the advantages of the user being able to see both the real and virtual objects simultaneously, AR is far more intuitive, but it's not completely detached from human factors and other restrictions. AR doesn't consume as much time and effort in the applications because it's not required to construct the entire virtual scene and the environment. In this book, several new and emerging application areas of AR are presented and divided into three sections. The first section contains applications in outdoor and mobile AR, such as construction, restoration, security and surveillance. The second section deals with AR in medical, biological, and human bodies. The third and final section contains a number of new and useful applications in daily living and learning

Realistic tool-tissue interaction models for surgical simulation and planning

Surgical simulators present a safe and potentially effective method for surgical training, and can also be used in pre- and intra-operative surgical planning. Realistic modeling of medical interventions involving tool-tissue interactions has been considered to be a key requirement in the development of high-fidelity simulators and planners. The soft-tissue constitutive laws, organ geometry and boundary conditions imposed by the connective tissues surrounding the organ, and the shape of the surgical tool interacting with the organ are some of the factors that govern the accuracy of medical intervention planning.\ud \ud This thesis is divided into three parts. First, we compare the accuracy of linear and nonlinear constitutive laws for tissue. An important consequence of nonlinear models is the Poynting effect, in which shearing of tissue results in normal force; this effect is not seen in a linear elastic model. The magnitude of the normal force for myocardial tissue is shown to be larger than the human contact force discrimination threshold. Further, in order to investigate and quantify the role of the Poynting effect on material discrimination, we perform a multidimensional scaling study. Second, we consider the effects of organ geometry and boundary constraints in needle path planning. Using medical images and tissue mechanical properties, we develop a model of the prostate and surrounding organs. We show that, for needle procedures such as biopsy or brachytherapy, organ geometry and boundary constraints have more impact on target motion than tissue material parameters. Finally, we investigate the effects surgical tool shape on the accuracy of medical intervention planning. We consider the specific case of robotic needle steering, in which asymmetry of a bevel-tip needle results in the needle naturally bending when it is inserted into soft tissue. We present an analytical and finite element (FE) model for the loads developed at the bevel tip during needle-tissue interaction. The analytical model explains trends observed in the experiments. We incorporated physical parameters (rupture toughness and nonlinear material elasticity) into the FE model that included both contact and cohesive zone models to simulate tissue cleavage. The model shows that the tip forces are sensitive to the rupture toughness. In order to model the mechanics of deflection of the needle, we use an energy-based formulation that incorporates tissue-specific parameters such as rupture toughness, nonlinear material elasticity, and interaction stiffness, and needle geometric and material properties. Simulation results follow similar trends (deflection and radius of curvature) to those observed in macroscopic experimental studies of a robot-driven needle interacting with gels

Towards Robot Autonomy in Medical Procedures Via Visual Localization and Motion Planning

Robots performing medical procedures with autonomous capabilities have the potential to positively effect patient care and healthcare system efficiency. These benefits can be realized by autonomous robots facilitating novel procedures, increasing operative efficiency, standardizing intra- and inter-physician performance, democratizing specialized care, and focusing the physician’s time on subtasks that best leverage their expertise. However, enabling medical robots to act autonomously in a procedural environment is extremely challenging. The deforming and unstructured nature of the environment, the lack of features in the anatomy, and sensor size constraints coupled with the millimeter level accuracy required for safe medical procedures introduce a host of challenges not faced by robots operating in structured environments such as factories or warehouses. Robot motion planning and localization are two fundamental abilities for enabling robot autonomy. Motion planning methods compute a sequence of safe and feasible motions for a robot to accomplish a specified task, where safe and feasible are defined by constraints with respect to the robot and its environment. Localization methods estimate the position and orientation of a robot in its environment. Developing such methods for medical robots that overcome the unique challenges in procedural environments is critical for enabling medical robot autonomy. In this dissertation, I developed and evaluated motion planning and localization algorithms towards robot autonomy in medical procedures. A majority of my work was done in the context of an autonomous medical robot built for enhanced lung nodule biopsy. First, I developed a dataset of medical environments spanning various organs and procedures to foster future research into medical robots and automation. I used this data in my own work described throughout this dissertation. Next, I used motion planning to characterize the capabilities of the lung nodule biopsy robot compared to existing clinical tools and I highlighted trade-offs in robot design considerations. Then, I conducted a study to experimentally demonstrate the benefits of the autonomous lung robot in accessing otherwise hard-to-reach lung nodules. I showed that the robot enables access to lung regions beyond the reach of existing clinical tools with millimeter-level accuracy sufficient for accessing the smallest clinically operable nodules. Next, I developed a localization method to estimate the bronchoscope’s position and orientation in the airways with respect to a preoperatively planned needle insertion pose. The method can be used by robotic bronchoscopy systems and by traditional manually navigated bronchoscopes. The method is designed to overcome challenges with tissue motion and visual homogeneity in the airways. I demonstrated the success of this method in simulated lungs undergoing respiratory motion and showed the method’s ability to generalize across patients.Doctor of Philosoph

Annals of Scientific Society for Assembly, Handling and Industrial Robotics

This Open Access proceedings present a good overview of the current research landscape of industrial robots. The objective of MHI Colloquium is a successful networking at academic and management level. Thereby the colloquium is focussing on a high level academic exchange to distribute the obtained research results, determine synergetic effects and trends, connect the actors personally and in conclusion strengthen the research field as well as the MHI community. Additionally there is the possibility to become acquainted with the organizing institute. Primary audience are members of the scientific association for assembly, handling and industrial robots (WG MHI)