Pyramiding of Meloidogyne hapla resistance genes in potato does not result in an increase of resistance

High levels of resistance against Meloidogyne hapla have been identified in wild species of tuber-bearing potatoes, but only QTL with partial effects have been identified so far in back crosses with cultivated potato. This study was designed to test if pyramiding of two previously identified resistance genes, R Mh-tar and R Mh-chc A, will result in improved or even an absolute level of resistance. R Mh-tar and R Mh-chc A introgressed from the wild tuber-bearing potato species Solanum tarijense and Solanum chacoense were combined in a segregating diploid Solanum tuberosum population. With the aid of AFLP markers, descendants from this segregating population were classified into four groups, carrying no R gene, with only R Mh-tar , with only R Mh-chc A and a group with the pyramided R Mh-tar and R Mh-chc A. Upon inoculation with M. hapla isolate Bovensmilde, the group containing only R Mh-chc A showed a decline of 88% in average number of developed egg masses compared to the group without R Mh-chc A and R Mh-tar . The group of genotypes containing only R Mh-tar , but not R Mh-chc A, showed a decline of 55% in the number of developed egg masses compared to the group without R Mh-chc A and R Mh-tar . Unfortunately, the latter effect of R Mh-tar was not significant. The effect of both loci, R Mh-tar and R Mh-chc A combined, did not further reduce the number of egg masses compared to the level of R Mh-chc A alon

Mating has opposite effects on male and female sexually selected cuticular hydrocarbons

In Drosophila serrata flies, there is female choice for male cuticular hydrocarbon (CHC) profiles and male choice for female CHC profiles. Furthermore, both males and females can alter their CHCs: when there is more opportunity for mating, males express combinations of CHCs preferred by females; however, females appear to change CHC profiles to avoid male harassment. In this study, I investigate the effect of number of matings (0–4) on male and female sexually selected CHCs. Mating caused males to express CHCs associated with higher male mating success. Thus, successfully mating males are likely to have increased future mating success. Conversely, females that mated more times expressed CHC profiles that were associated with lower female mating success. Females maximized their offspring production by mating more than once, but additional matings did not provide additional benefits. Furthermore, number of matings did not affect female survival. In total, these results suggest that females alter CHC expression to discourage male courtship when additional matings are not beneficial. In conclusion, plasticity in male and female CHC expression can both increase variance in male mating success and decrease variance in female mating success, driving the evolution of sexually selected chemical signals

Comparison of Cuticular Hydrocarbons in Three Populations of the Carpenter Bee “Ceratina calcarata” to help Understand their Role in Social Evolution

For the second summer in a row I analysed the composition of cuticular hydrocarbons (CHCs) on carpenter bees Ceratina calcarata, this time in populations from Missouri and Georgia as well as from New Hampshire. My goal was to find out if the CHC compositions differed significantly among these three populations. My results affirmed our prediction that the CHC composition varies by population, though there does appear to be some overlap across populations. The CHC variation observed suggests that chemical composition changes with latitude. CHCs are thought to have initially evolved to prevent water loss and then became part of chemical communication among individuals. Communication among insects plays a large role in their behavior and is critical to the development of complex social systems

Availability and information needs in the chemical contaminants domain – PortFIR assessment

Chemical contaminants (Chc) can be naturally present and/or be introduced in food and feed as result of the various stages of its production, processing and transport and/or due to environmental contamination. The analysis of Chc laboratory data allows to generate information for continuous improvement of food safety and protection of public health. In order to define priorities for development of the Contaminants Database of the Portuguese Food Information Resource (PortFIR), it was decided to identify and assess the availability and information needs on food and feed Chc of the main Portuguese stakeholders in the area.N/

Clathrin Heavy Chain subunits coordinate endo- and exocytic traffic and affect stomatal movement

The current model for vesicular traffic to and from the plasma membrane is accepted but the molecular requirements for this coordination are not well defined. We have identified the has1 mutant, which has a stomatal function defect, as a clathrin heavy chain 1 (CHC1) mutant allele and show that it has a decreased rate of endocytosis and growth defects that are shared with other chc1 mutant alleles. We used chc1 alleles and the related chc2 mutant as tools to investigate the effects clathrin defects have on secretion pathways and plant growth. We show that secretion and endocytosis at the plasma membrane is sensitive to CHC1 and CHC2 function in seedling roots, and that chc mutants have physiological defects in stomatal function and plant growth that have not been previously described. These findings suggest that clathrin supports specific functions of multiple cell types. Stomata movement and gas exchange is altered in chc mutants, indicating clathrin is important for stomatal regulation. The aberrant function of chc mutant stomata is consistent with the growth phenotypes observed under different water and light conditions, which are also similar to those of the secretory SNARE mutant, syp121. The syp121 and chc mutants have impaired endo- and exocytosis compared to wild type, indicating a link between SYP121-dependent secretion and clathrin-dependent endocytosis at the plasma membrane. Our findings provide evidence that clathrin and SYP121 functions are important for the coordination of endo- and exocytosis, and have an impact on stomatal function, gas exchange, and vegetative growth in Arabidopsis

The Role of Parvalbumin-positive Interneurons in Auditory Steady-State Response Deficits in Schizophrenia

© The Author(s) 2019. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.Despite an increasing body of evidence demonstrating subcellular alterations in parvalbumin-positive (PV+) interneurons in schizophrenia, their functional consequences remain elusive. Since PV+ interneurons are involved in the generation of fast cortical rhythms, these changes have been hypothesized to contribute to well-established alterations of beta and gamma range oscillations in patients suffering from schizophrenia. However, the precise role of these alterations and the role of different subtypes of PV+ interneurons is still unclear. Here we used a computational model of auditory steady-state response (ASSR) deficits in schizophrenia. We investigated the differential effects of decelerated synaptic dynamics, caused by subcellular alterations at two subtypes of PV+ interneurons: basket cells and chandelier cells. Our simulations suggest that subcellular alterations at basket cell synapses rather than chandelier cell synapses are the main contributor to these deficits. Particularly, basket cells might serve as target for innovative therapeutic interventions aiming at reversing the oscillatory deficits.Peer reviewe

A Prospective Study of Long-term Outcomes in Female Patients with Nonalcoholic Steatohepatitis Using Age- and Body Mass Index-matched Cohorts

In patients with nonalcoholic steatohepatitis (NASH), the prevalence of cirrhosis is higher among women than men, and hepatocellular carcinoma (HCC) develops mainly in the cirrhotic stage among women. However, the long-term outcomes in female patients with NASH have not been fully elucidated, and age, gender and BMI were not simultaneously adjusted in previous studies on the prognosis of NASH. To elucidate the outcomes in female patients with NASH, we prospectively compared NASH patients with advanced fibrosis (advanced NASH) with hepatitis C virus-related advanced fibrosis (advanced CHC) patients and NASH patients with mild fibrosis (mild NASH) using study cohorts that were adjusted for body mass index (BMI) in addition to age. The median follow-up period was 92.5 months. Liver-related complication-free survival was significantly reduced in the advanced NASH group compared to the mild NASH group. No liver-related complications developed in the mild NASH group. The overall survival, liver-related complication- and cardiovascular/cerebrovascular disease-free survival were not significantly different between the advanced NASH and CHC groups. Female patients with NASH and advanced fibrosis may have a less favorable prognosis for liver-related complications than the matched cohorts with NASH and mild fibrosis, but may have a similar prognosis to the matched cohorts with CHC

Liver mortality attributable to chronic hepatitis C virus infection in Denmark and Scotland: using spontaneous resolvers as the benchmark comparator

Liver mortality among individuals with chronic hepatitis C (CHC) infection is common, but the relative contribution of CHC per se versus adverse health behaviors is uncertain. We explored data on spontaneous resolvers of hepatitis C virus (HCV) as a benchmark group to uncover the independent contribution of CHC on liver mortality. Using national HCV diagnosis and mortality registers from Denmark and Scotland, we calculated the liver mortality rate (LMR) for persons diagnosed with CHC infection (LMR chronic) and spontaneously resolved infection (LMR resolved), according to subgroups defined by age, sex, and drug use. Through these mortality rates, we determined subgroup-specific attributable fractions (AFs), defined as (LMR chronic - LMR resolved)/LMR chronic, and then calculated the total attributable fraction (TAF) as a weighted average of these AFs. Thus, the TAF represents the overall fraction (where 0.00 = not attributable at all; and 1.00 = entirely attributable) of liver mortality attributable to CHC in the diagnosed population. Our cohort comprised 7,005 and 21,729 persons diagnosed with HCV antibodies in Denmark and Scotland, respectively. Mean follow-up duration was 6.3-6.9 years. The TAF increased stepwise with age. It was lowest for death occurring at &lt;45 years of age (0.21 in Denmark; 0.26 in Scotland), higher for death occurring at 45-59 years (0.69 in Denmark; 0.69 in Scotland), and highest for death at 60+years (0.92 in Denmark; 0.75 in Scotland). Overall, the TAF was 0.66 (95% confidence interval [CI]: 0.55-0.78) in Denmark and 0.55 (95% CI: 0.44-0.66) in Scotland. Conclusions: In Denmark and Scotland, the majority of liver death in the CHC-diagnosed population can be attributed to CHC-nevertheless, an appreciable fraction cannot, cautioning that liver mortality in this population is a compound problem that can be reduced, but not solved, through antiviral therapy alone. </p

Modeling the Effect of Oceanic Internal Waves on the Accuracy of Multibeam Echosounders

When ray bending corrections are applied to multibeam echosounder (MBES) data, it is assumed that the varying layers of sound speed lie along horizontally stratified planes. In many areas internal waves occur at the interface where the water’s density changes abruptly (a pycnocline), this density gradient is often associated with a strong gradient in sound speed (a velocline). The internal wave introduces uncertainty into the echo soundings through two mechanisms: (1) tilting of the velocline, and (2) vertical oscillation of the velocline’s depth. A model has been constructed in order to examine how these effects degrade the accuracy of MBES measurements. The model numerically simulates the 3D ray paths of MBES soundings for a synthetic flat seafloor, as though the soundings have been collected through a user-defined internal wave. Along with sound speed information, the ray paths are used to estimate travel times which are then utilized as inputs for a conventional 2D ray trace. The discrepancy between the 3D and 2D ray traced solutions serve as an estimate of uncertainty. The same software can be extended to model the expected anomalies associated with tidal fronts and other phenomena that result in significant tilting or oscillation of the velocline. A case study was undertaken using observed internal wave parameters on the Scotian Shelf. The case study examines how survey design parameters such as line spacing, direction of survey lines, and water column sampling density can influence the uncertainty introduced by internal waves. In particular, an examination is undertaken in which 2D ray tracing models are augmented with MBES water column imaging of the velocline. The investigation shows that internal waves have the potential to cause vertical uncertainties exceeding IHO standards and that the uncertainty can potentially be mitigated through appropriate survey design. Results from the case study also indicate that acoustic tracking of the velocline has the potential to counteract the effects of internal waves through augmentation of 2D ray tracing models. This technique is promising, however, much more research and field testing is required to ascertain the practicality, reliability and repeatability of such an approach