Harnessing the Power of Many: Extensible Toolkit for Scalable Ensemble Applications

Many scientific problems require multiple distinct computational tasks to be executed in order to achieve a desired solution. We introduce the Ensemble Toolkit (EnTK) to address the challenges of scale, diversity and reliability they pose. We describe the design and implementation of EnTK, characterize its performance and integrate it with two distinct exemplar use cases: seismic inversion and adaptive analog ensembles. We perform nine experiments, characterizing EnTK overheads, strong and weak scalability, and the performance of two use case implementations, at scale and on production infrastructures. We show how EnTK meets the following general requirements: (i) implementing dedicated abstractions to support the description and execution of ensemble applications; (ii) support for execution on heterogeneous computing infrastructures; (iii) efficient scalability up to O(10^4) tasks; and (iv) fault tolerance. We discuss novel computational capabilities that EnTK enables and the scientific advantages arising thereof. We propose EnTK as an important addition to the suite of tools in support of production scientific computing

A study of early stopping, ensembling, and patchworking for cascade correlation neural networks

The constructive topology of the cascade correlation algorithm makes it a popular choice for many researchers wishing to utilize neural networks. However, for multimodal problems, the mean squared error of the approximation increases significantly as the number of modes increases. The components of this error will comprise both bias and variance and we provide formulae for estimating these values from mean squared errors alone. We achieve a near threefold reduction in the overall error by using early stopping and ensembling. Also described is a new subdivision technique that we call patchworking. Patchworking, when used in combination with early stopping and ensembling, can achieve an order of magnitude improvement in the error. Also presented is an approach for validating the quality of a neural network’s training, without the explicit use of a testing dataset

Improving the performance of cascade correlation neural networks on multimodal functions

Intrinsic qualities of the cascade correlation algorithm make it a popular choice for many researchers wishing to utilize neural networks. Problems arise when the outputs required are highly multimodal over the input domain. The mean squared error of the approximation increases significantly as the number of modes increases. By applying ensembling and early stopping, we show that this error can be reduced by a factor of three. We also present a new technique based on subdivision that we call patchworking. When used in combination with early stopping and ensembling the mean improvement in error is over 10 in some cases