Multi-filter transit observations of WASP-39b and WASP-43b with three San Pedro M\'artir telescopes

Three optical telescopes located at the San Pedro M\'artir National Observatory were used for the first time to obtain multi-filter defocused photometry of the transiting extrasolar planets WASP-39b and WASP-43b. We observed WASP-39b with the 2.12m telescope in the U filter for the first time, and additional observations were carried out in the R and I filters using the 0.84m telescope. WASP-43b was observed in VRI with the same instrument, and in the i filter with the robotic 1.50m telescope. We reduced the data using different pipelines and performed aperture photometry with the help of custom routines, in order to obtain the light curves. The fit of the light curves (1.5--2.5mmag rms), and of the period analysis, allowed a revision of the orbital and physical parameters, revealing for WASP-39b a period ($4.0552947 \pm 9.65 \times 10^{-7}$ days) which is $3.084 \pm 0.774$ seconds larger than previously reported. Moreover, we find for WASP-43b a planet/star radius ($0.1738 \pm 0.0033$) which is $0.01637 \pm 0.00371$ larger in the i filter with respect to previous works, and that should be confirmed with additional observations. Finally, we confirm no evidence of constant period variations in WASP-43b.Comment: 13 pages, 7 figures, accepted in PASP, scheduled for the February 1, 2015 issu

Reporting methodological search filter performance comparisons : a literature review

© 2014 The authors. Health Information and Libraries Journal © 2014 Health Libraries Journal.Peer reviewedPostprin

Conceptual biology, hypothesis discovery, and text mining: Swanson's legacy

Innovative biomedical librarians and information specialists who want to expand their roles as expert searchers need to know about profound changes in biology and parallel trends in text mining. In recent years, conceptual biology has emerged as a complement to empirical biology. This is partly in response to the availability of massive digital resources such as the network of databases for molecular biologists at the National Center for Biotechnology Information. Developments in text mining and hypothesis discovery systems based on the early work of Swanson, a mathematician and information scientist, are coincident with the emergence of conceptual biology. Very little has been written to introduce biomedical digital librarians to these new trends. In this paper, background for data and text mining, as well as for knowledge discovery in databases (KDD) and in text (KDT) is presented, then a brief review of Swanson's ideas, followed by a discussion of recent approaches to hypothesis discovery and testing. 'Testing' in the context of text mining involves partially automated methods for finding evidence in the literature to support hypothetical relationships. Concluding remarks follow regarding (a) the limits of current strategies for evaluation of hypothesis discovery systems and (b) the role of literature-based discovery in concert with empirical research. Report of an informatics-driven literature review for biomarkers of systemic lupus erythematosus is mentioned. Swanson's vision of the hidden value in the literature of science and, by extension, in biomedical digital databases, is still remarkably generative for information scientists, biologists, and physicians. © 2006Bekhuis; licensee BioMed Central Ltd

Coherence methods in mapping AVO anomalies and predicting P-wave and S-wave impedances

Filters for migrated offset substacks are designed by partial coherence analysis to predict ‘normal’ amplitude variation with offset (AVO) in an anomaly free area. The same prediction filters generate localized prediction errors when applied in an AVO-anomalous interval. These prediction errors are quantitatively related to the AVO gradient anomalies in a background that is related to the minimum AVO anomaly detectable from the data. The prediction-error section is thus used to define a reliability threshold for the identification of AVO anomalies. Coherence analysis also enables quality control of AVO analysis and inversion. For example, predictions that are non-localized and/or do not show structural conformity may indicate spatial variations in amplitude–offset scaling, seismic wavelet or signal-to-noise (S/N) ratio content. Scaling and waveform variations can be identified from inspection of the prediction filters and their frequency responses. S/N ratios can be estimated via multiple coherence analysis. AVO inversion of seismic data is unstable if not constrained. However, the use of a constraint on the estimated parameters has the undesirable effect of introducing biases into the inverted results: an additional bias-correction step is then needed to retrieve unbiased results. An alternative form of AVO inversion that avoids additional corrections is proposed. This inversion is also fast as it inverts only AVO anomalies. A spectral coherence matching technique is employed to transform a zero-offset extrapolation or near-offset substack into P-wave impedance. The same technique is applied to the prediction-error section obtained by means of partial coherence, in order to estimate S-wave velocity to P-wave velocity (VS/VP) ratios. Both techniques assume that accurate well ties, reliable density measurements and P-wave and S-wave velocity logs are available, and that impedance contrasts are not too strong. A full Zoeppritz inversion is required when impedance contrasts that are too high are encountered. An added assumption is made for the inversion to the VS/VP ratio, i.e. the Gassmann fluid-substitution theory is valid within the reservoir area. One synthetic example and one real North Sea in-line survey illustrate the application of the two coherence methods

A Systematic Review of the Evidence for the Sustainability of Household Water Treatment Interventions

This systematic review assesses the quantity and quality of evidence for the sustainability of household water treatment (HWT) since the World Health Organization (WHO) recently endorsed HWT based on growing evidence of HWT's ability to improve microbial water quality, effectiveness at reducing diarrheal disease, cost-effectiveness, and rapid application and acceptance. A large portion of the world population still relies on unsafe sources of drinking water, but whether HWT can support scaling-up efforts and be considered sustainable, it remains to be seen. Ultimately this systematic review found limited evidence of a sustained uptake and usage of HWT interventions, and results from studies that found high levels of confirmed usage after one year must be considered alongside their methodological quality