5 research outputs found
Learning Arbitrary Statistical Mixtures of Discrete Distributions
We study the problem of learning from unlabeled samples very general
statistical mixture models on large finite sets. Specifically, the model to be
learned, , is a probability distribution over probability
distributions , where each such is a probability distribution over . When we sample from , we do not observe
directly, but only indirectly and in very noisy fashion, by sampling from
repeatedly, independently times from the distribution . The problem is
to infer to high accuracy in transportation (earthmover) distance.
We give the first efficient algorithms for learning this mixture model
without making any restricting assumptions on the structure of the distribution
. We bound the quality of the solution as a function of the size of
the samples and the number of samples used. Our model and results have
applications to a variety of unsupervised learning scenarios, including
learning topic models and collaborative filtering.Comment: 23 pages. Preliminary version in the Proceeding of the 47th ACM
Symposium on the Theory of Computing (STOC15
A rigorous analysis of population stratification with limited data
Abstract Finding the genetic factors of complex diseases such as can-cer, currently a major effort of the international community, will potentially lead to better treatment of these diseases.One of the major difficulties in these studies, is the fact that the genetic components of an individual not only depend onthe disease, but also on its ethnicity. Therefore, it is crucial to find methods that could reduce the population structureeffects on these studies. This can be formalized as a clustering problem, where the individuals are clustered accordingto their genetic information. Mathematically, we consider the problem of clusteringbit "feature " vectors, where each vector represents the genetic information of an individual. Our model assumes thatthis bit vector is generated according to a prior probability distribution specified by the individual's membership in apopulation. We present methods that can cluster the vectors while attempting to optimize the number of featuresrequired. The focus of the paper is not on the algorithms, but on showing that optimizing certain objective functionson the data yields the right clustering, under the random generative model. In particular, we prove that some of theprevious formulations for clustering are effective. We consider two different clustering approaches. Thefirst approach forms a graph, and then clusters the data using a connected components algorithm, or a max cut algo-rithm. The second approach tries to estimate simultanously the feature frequencies in each of the populations, and theclassification of vectors into populations. We show that using the first approach \Theta (log N/fl2) data (i.e., total numberof features times number of vectors) is sufficient to find the correct classification, where N is the number of vectors of each population, and fl is the average `22 distance betweenthe feature probability vectors of the two populations. Using the second approach, we show that O(log N/ff4) datais enough, where ff is the average ` 1 distance between thepopulations