Survey of Distributed Decision

We survey the recent distributed computing literature on checking whether a given distributed system configuration satisfies a given boolean predicate, i.e., whether the configuration is legal or illegal w.r.t. that predicate. We consider classical distributed computing environments, including mostly synchronous fault-free network computing (LOCAL and CONGEST models), but also asynchronous crash-prone shared-memory computing (WAIT-FREE model), and mobile computing (FSYNC model)

Construction of minimal DFAs from biological motifs

Deterministic finite automata (DFAs) are constructed for various purposes in computational biology. Little attention, however, has been given to the efficient construction of minimal DFAs. In this article, we define simple non-deterministic finite automata (NFAs) and prove that the standard subset construction transforms NFAs of this type into minimal DFAs. Furthermore, we show how simple NFAs can be constructed from two types of patterns popular in bioinformatics, namely (sets of) generalized strings and (generalized) strings with a Hamming neighborhood

Building Efficient and Compact Data Structures for Simplicial Complexes

The Simplex Tree (ST) is a recently introduced data structure that can represent abstract simplicial complexes of any dimension and allows efficient implementation of a large range of basic operations on simplicial complexes. In this paper, we show how to optimally compress the Simplex Tree while retaining its functionalities. In addition, we propose two new data structures called the Maximal Simplex Tree (MxST) and the Simplex Array List (SAL). We analyze the compressed Simplex Tree, the Maximal Simplex Tree, and the Simplex Array List under various settings.Comment: An extended abstract appeared in the proceedings of SoCG 201

Minimizing Tree Automata for Unranked Trees

International audienceAutomata for unranked trees form a foundation for XML schemas, querying and pattern languages. We study the problem of efficiently minimizing such automata. We start with the unranked tree automata (UTAs) that are standard in database theory, assuming bottom-up determinism and that horizontal recursion is represented by deterministic finite automata. We show that minimal UTAs in that class are not unique and that minimization is NP-hard. We then study more recent automata classes that do allow for polynomial time minimization. Among those, we show that bottom-up deterministic stepwise tree automata yield the most succinct representations