Hybrid modeling, HMM/NN architectures, and protein applications

We describe a hybrid modeling approach where the parameters of a model are calculated and modulated by another model, typically a neural network (NN), to avoid both overfitting and underfitting. We develop the approach for the case of Hidden Markov Models (HMMs), by deriving a class of hybrid HMM/NN architectures. These architectures can be trained with unified algorithms that blend HMM dynamic programming with NN backpropagation. In the case of complex data, mixtures of HMMs or modulated HMMs must be used. NNs can then be applied both to the parameters of each single HMM, and to the switching or modulation of the models, as a function of input or context. Hybrid HMM/NN architectures provide a flexible NN parameterization for the control of model structure and complexity. At the same time, they can capture distributions that, in practice, are inaccessible to single HMMs. The HMM/NN hybrid approach is tested, in its simplest form, by constructing a model of the immunoglobulin protein family. A hybrid model is trained, and a multiple alignment derived, with less than a fourth of the number of parameters used with previous single HMMs

Optimization of convolutional neural networks for image classification using genetic algorithms and bayesian optimization

Notwithstanding the recent successes of deep convolutional neural networks for classification tasks, they are sensitive to the selection of their hyperparameters, which impose an exponentially large search space on modern convolutional models. Traditional hyperparameter selection methods include manual, grid, or random search, but these require expert knowledge or are computationally burdensome. Divergently, Bayesian optimization and evolutionary inspired techniques have surfaced as viable alternatives to the hyperparameter problem. Thus, an alternative hybrid approach that combines the advantages of these techniques is proposed. Specifically, the search space is partitioned into discrete-architectural, and continuous and categorical hyperparameter subspaces, which are respectively traversed by a stochastic genetic search, followed by a genetic-Bayesian search. Simulations on a prominent image classification task reveal that the proposed method results in an overall classification accuracy improvement of 0.87% over unoptimized baselines, and a greater than 97% reduction in computational costs compared to a commonly employed brute force approach.Electrical and Mining EngineeringM. Tech. (Electrical Engineering

Hybrid Collaborative Filtering with Autoencoders

Collaborative Filtering aims at exploiting the feedback of users to provide personalised recommendations. Such algorithms look for latent variables in a large sparse matrix of ratings. They can be enhanced by adding side information to tackle the well-known cold start problem. While Neu-ral Networks have tremendous success in image and speech recognition, they have received less attention in Collaborative Filtering. This is all the more surprising that Neural Networks are able to discover latent variables in large and heterogeneous datasets. In this paper, we introduce a Collaborative Filtering Neural network architecture aka CFN which computes a non-linear Matrix Factorization from sparse rating inputs and side information. We show experimentally on the MovieLens and Douban dataset that CFN outper-forms the state of the art and benefits from side information. We provide an implementation of the algorithm as a reusable plugin for Torch, a popular Neural Network framework

English character recognition algorithm by improving the weights of MLP neural network with dragonfly algorithm

Character Recognition (CR) is taken into consideration for years. Meanwhile, the neural network plays an important role in recognizing handwritten characters. Many character identification reports have been publishing in English, but still the minimum training timing and high accuracy of handwriting English symbols and characters by utilizing a method of neural networks are represents as open problems. Therefore, creating a character recognition system manually and automatically is very important. In this research, an attempt has been done to incubate an automatic symbols and character system for recognition for English with minimum training and a very high recognition accuracy and classification timing. In the proposed idea for improving the weights of the MLP neural network method in the process of teaching and learning character recognition, the dragonfly optimization algorithm has been used. The innovation of the proposed detection system is that with a combination of dragonfly optimization technique and MLP neural networks, the precisions of the system are recovered, and the computing time is minimized. The approach which was used in this study to identify English characters has high accuracy and minimum training time