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ViewDock TDW: high-throughput visualization of virtual screening results

By Christopher D. Lau, Marshall J. Levesque, Shu Chien, Susumu Date and Jason H. Haga

Abstract

Summary: ViewDock TDW is a modification of the pre-existing ViewDock Chimera extension (http://www.cgl.ucsf.edu/chimera/) used to visualize results of virtual screening experiments. By combing TDW hardware and an enhanced ViewDock interface, dozens of ligand–protein complexes are rendered simultaneously to parallelize the analysis of candidate ligands. The ViewDock TDW GUI allows the user to easily and interactively manipulate the molecules on the TDW as an entire set, a selected subset or a single ligand–protein complex and preserves all Chimera functionality

Topics: Applications Note
Publisher: Oxford University Press
OAI identifier: oai:pubmedcentral.nih.gov:2905552
Provided by: PubMed Central
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