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Enhancing Peptide Identification Confidence by Combining Search Methods

By Gelio Alves, Wells W. Wu, Guanghui Wang, Rong-Fong Shen and Yi-Kuo Yu
Publisher: American Chemical Society
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Provided by: PubMed Central
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    1. (2002). A probabilistic algorithm to identify peptides through sequence database searching using tandem mass spectral data. Proteomics
    2. (1994). An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.
    3. (2005). An evaluation, comparison, and accurate benchmarking of several publicly available ms/ms search algorithms: sensitivity and specificity analysis. Proteomics
    4. (1998). Combining evidence using p-values: application to sequence homology searches. Bioinformatics
    5. (2005). Comparison of different search engines using validated MS/MS test datasets.
    6. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing.
    7. (2002). Empirical statistical model to estimate the accuracy of peptide identifications made by ms/ms and database
    8. (2008). Experimental protein mixture for validating tandem mass spectral analysis.
    9. (2005). Inspect: Identification of posttranslationally modified peptides from tandem mass spectra.
    10. (2007). library search methods.
    11. (2002). Multiple hypotheses testing and expected number of type I errors.
    12. (1991). On fisher’s method of combining p -values.
    13. Open mass spectrometry search algorithm.
    14. (1999). Probability-based protein identification by searching sequence database using mass spectrometry data. Electrophoresis
    15. (2007). RAId_DbS: Peptide identification using database searches with realistic statistics.
    16. (2003). Resampling-based multiple testing for microarray data analysis. Test
    17. (2006). Retrieval accuracy, statistical significance and compositional similarity in protein sequence database searches. Nucleic Acids Res.
    18. (1958). Statistical Methods for Research Workers, 2nd ed.; Hafner:
    19. (2004). Tandem: matching proteins with tandem mass spectra. Bioinformatics

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