A Radial Basis Function (RBF)-Finite Difference (FD) Method for Diffusion and Reaction–Diffusion Equations on Surfaces

Abstract

In this paper, we present a method based on radial basis function (RBF)-generated finite differences (FD) for numerically solving diffusion and reaction–diffusion equations (PDEs) on closed surfaces embedded in Rd. Our method uses a method-of-lines formulation, in which surface derivatives that appear in the PDEs are approximated locally using RBF interpolation. The method requires only scattered nodes representing the surface and normal vectors at those scattered nodes. All computations use only extrinsic coordinates, thereby avoiding coordinate distortions and singularities. We also present an optimization procedure that allows for the stabilization of the discrete differential operators generated by our RBF-FD method by selecting shape parameters for each stencil that correspond to a global target condition number. We show the convergence of our method on two surfaces for different sten-cil sizes, and present applications to nonlinear PDEs simulated both on implicit/parametric surfaces and more general surfaces represented by point clouds