Plymouth Marine Laboratory

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    8405 research outputs found

    Temporal variation in the structure, abundance, and composition of Laminaria hyperborea forests and their associated understorey assemblages over an intense storm season

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    Kelp species function as important foundation organisms in coastal marine ecosystems where they provide biogenic habitat and ameliorate environmental conditions, often facilitating the development of diverse understorey assemblages. The structure of kelp forests is influenced by a variety of environmental factors, changes in which can result in profound shifts in ecological structure and functioning. Intense storm-induced wave action in particular, can severely impact kelp forest ecosystems. Given that storms are anticipated to increase in frequency and intensity in response to anthropogenic climate change, it is critical to understand their potential impacts on kelp forest ecosystems. During the 2021/22 northeast Atlantic storm season, the United Kingdom (UK) was subject to several intense storms, of which the first and most severe was Storm Arwen. Due to the unusual northerly wind direction, the greatest impacts of Storm Arwen were felt along the northeast coast of the UK where wind gusts exceeded 90 km/h, and inshore significant wave heights of 7.2 m and wave periods of 9.3 s were recorded. Here, we investigated temporal and spatial variation in the structure of L. hyperborea forests and associated understorey assemblages along the northeast coast of the UK over the 2021/22 storm season. We found significant changes in the cover, density, length, biomass, and age structure of L. hyperborea populations and the composition of understorey assemblages following the storm season, particularly at our most north facing site. We suggest continuous monitoring of these systems to further our understanding of temporal variation and potential recovery trajectories, alongside enhanced management to promote resilience to future perturbation

    Predictors of long-term variability in NE Atlantic plankton communities

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    Anthropogenic pressures such as climate change and nutrient pollution are causing rapid changes in the marine environment. The relative influence of drivers of change on the plankton community remains uncertain, and this uncertainty is limiting our understanding of sustainable levels of human pressures. Plankton are the primary energy resource in marine food webs and respond rapidly to environmental changes, representing useful indicators of shifts in ecosystem structure and function. Categorising plankton into broad groups with similar characteristics, known as “lifeforms”, can be useful for understanding ecological patterns related to environmental change and for assessing the state of pelagic habitats in accordance with the EU Marine Strategy Framework Directive and the OSPAR Commission, which mandates protection of the North-East Atlantic. We analysed 29 years of Continuous Plankton Recorder data (1993–2021) from the North-East Atlantic to examine how trends in plankton lifeform abundance changed in relation to one another and across gradients of environmental change associated with human pressures. Random forest models predicted between 57 % and 80 % of the variability in lifeform abundance, based on data not used to train the models. Observed variability was mainly explained by trends in other lifeforms, with mainly positively correlated trends, indicating bottom-up control and/or shared responses to environmental variability were prevalent. Longitude, bathymetry, mixed layer depth, the nitrogen-to‑phosphorus ratio, and temperature were also significant predictors. However, contrasting influences of environmental drivers were detected. For example, small copepod abundance increased in warmer conditions whereas meroplankton, large copepods and fish larvae either decreased or were unchanged. Our findings highlight recent changes in stratification, reflected by variation in mixed layer depth, and imbalanced nutrient ratios are affecting multiple lifeforms, impacting the North-East Atlantic plankton community. To achieve environmental improvements in North-East Atlantic pelagic habitats, it is crucial that we continue to address climate change and reduce nutrient pollutio

    Atmospheric oxygen as a tracer for fossil fuel carbon dioxide: a sensitivity study in the UK

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    We investigate the use of atmospheric oxygen (O2) and carbon dioxide (CO2) measurements for the estimation of the fossil fuel component of atmospheric CO2 in the UK. Atmospheric potential oxygen (APO) – a tracer that combines O2 and CO2, minimizing the influence of terrestrial biosphere fluxes – is simulated at three sites in the UK, two of which make APO measurements. We present a set of model experiments that estimate the sensitivity of APO simulations to key inputs: fluxes from the ocean, fossil fuel flux magnitude and distribution, the APO baseline, and the exchange ratio of O2 to CO2 fluxes from fossil fuel combustion and the terrestrial biosphere. To estimate the influence of uncertainties in ocean fluxes, we compare three ocean O2 flux estimates from the NEMO–ERSEM, the ECCO–Darwin ocean model, and the Jena CarboScope (JC) APO inversion. The sensitivity of APO to fossil fuel emission magnitudes and to terrestrial biosphere and fossil fuel exchange ratios is investigated through Monte Carlo sampling within literature uncertainty ranges and by comparing different inventory estimates. We focus our model–data analysis on the year 2015 as ocean fluxes are not available for later years. As APO measurements are only available for one UK site at this time, our analysis focuses on the Weybourne station. Model–data comparisons for two additional UK sites (Heathfield and Ridge Hill) in 2021, using ocean flux climatologies, are presented in the Supplement. Of the factors that could potentially compromise simulated APO-derived fossil fuel CO2 (ffCO2) estimates, we find that the ocean O2 flux estimate has the largest overall influence at the three sites in the UK. At times, this influence is comparable in magnitude to the contribution of simulated fossil fuel CO2 to simulated APO. We find that simulations using different ocean fluxes differ from each other substantially. No single model estimate, or a model estimate that assumed zero ocean flux, provided a significantly closer fit than any other. Furthermore, the uncertainty in the ocean contribution to APO could lead to uncertainty in defining an appropriate regional background from the data. Our findings suggest that the contribution of non-terrestrial sources needs to be better accounted for in model simulations of APO in the UK to reduce the potential influence on inferred fossil fuel CO2 using APO

    Identifying potential high-risk zones for land-derived plastic litter to marine megafauna and key habitats within the North Atlantic

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    The pervasive use of plastic in modern society has led to plastic litter becoming ubiquitous within the ocean. Land-based sources of plastic litter are thought to account for the majority of plastic pollution in the marine environment, with plastic bags, bottles, wrappers, food containers and cutlery among the most common items found. In the marine environment, plastic is a transboundary pollutant, with the potential to cause damage far beyond the political borders from where it originated, making the management of this global pollutant particularly complex. In this study, the risks of land-derived plastic litter (LDPL) to major groups of marine megafauna – seabirds, cetaceans, pinnipeds, elasmobranchs, turtles, sirenians, tuna and billfish – and a selection of productive and biodiverse biogenic habitats – coral reefs, mangroves, seagrass, saltmarsh and kelp beds – were analysed using a Spatial Risk Assessment approach. The approach combines metrics for vulnerability (mechanism of harm for megafauna group or habitat), hazard (plastic abundance) and exposure (distribution of group or habitat). Several potential high-risk zones (HRZs) across the North Atlantic were highlighted, including the Azores, the UK, the French and US Atlantic coasts, and the US Gulf of Mexico. Whilst much of the modelled LDPL driving risk in the UK originated from domestic sources, in other HRZs, such as the Azores archipelago and the US Gulf of Mexico, plastic originated almost exclusively from external (non-domestic) sources. LDPL from Caribbean islands - some of the largest generators of marine plastic pollution in the dataset of river plastic emissions used in the study - was noted as a significant input to HRZs across both sides of the Atlantic. These findings highlight the potential of Spatial Risk Assessment analyses to determine the location of HRZs and understand where plastic debris monitoring and management should be prioritised, enabling more efficient deployment of interventions and mitigation measures

    Intertidal seagrass extent from Sentinel-2 time-series show distinct trajectories in Western Europe

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    Intertidal areas, which emerge during low tide, form a vital link between terrestrial and marine environments. Seagrasses, a well-studied intertidal habitat, provide a multitude of different ecosystem goods and services. However, owing to their relatively high exposure to anthropogenic impacts, seagrasss meadows and other intertidal habitats have seen extensive declines. Remote sensing methods that can capture the spatial and temporal variation of marine habitats are essential to best assess the trajectories of seagrass ecosystems. An advanced machine learning method has been developed to map intertidal vegetation from satellite-derived surface reflectance at a 12-band multispectral resolution and distinguish between similarly pigmented intertidal macrophytes, such as seagrass and green algae. The Intertidal Classification of Europe: Categorising Reflectance of Emerged Areas of Marine vegetation with Sentinel-2 (ICE CREAMS v1.0), a neural network model trained on over 300,000 Sentinel-2 pixels to identify different intertidal habitats, was applied to the open-access long term archive of systematically collected Sentinel-2 imagery to provide 7 years (2017–2023) worth of intertidal seagrass dynamics in 6 sites across Western Europe (471 Sentinel-2 Images). A combination of independently collected visually inspected Uncrewed Aerial Vehicle imagery and in situ quadrat images were used to validate ICE CREAMS. Having achieved a high seagrass classification accuracy (0.82 over 12,000 pixels) and consistent conversion into cover (19% RMSD), the ICE CREAMS model outputs provided evidence of site specific variation in trajectories of seagrass extent, when appropriate consideration of intra-annual variation has been considered. Inter-annual dynamics of sites showed some instances of consistent change, some indicated stability, while others indicated instability over time, characterised by increases and decreases across the time-series in seagrass coverage. This methological pipeline has helped to create up-to-date monitoring data that, with the planned continuation of the Sentinel missions, will allow almost real-time monitoring of these habitats into the future. This process, and the data it provides, could aid management practitioners from regional to international levels, with the ability to monitor intertidal seagrass meadows at both high spatial and temporal resolution, over continental scales. The implementation of Earth Observation for high-resolution monitoring of intertidal seagrasses could therefore allow for gap-filling seagrass datasets, and sustain specific and rapid management measure

    The genome sequence of a segmented worm, Terebella lapidaria Linnaeus, 1767

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    We present a genome assembly from an individual Terebella lapidaria(segmented worm; Annelida; Polychaeta; Terebellida; Terebellidae).The genome sequence spans 765.20 megabases. Most of the assembly is scaffolded into 16 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 15.97 kilobases in length

    Global impacts of marine heatwaves on coastal foundation species

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    With increasingly intense marine heatwaves affecting nearshore regions, foundation species are coming under increasing stress. To better understand their impacts, we examine responses of critical, habitat-forming foundation species (macroalgae, seagrass, corals) to marine heatwaves in 1322 shallow coastal areas located across 85 marine ecoregions. We find compelling evidence that intense, summer marine heatwaves play a significant role in the decline of foundation species globally. Critically, detrimental effects increase towards species warm-range edges and over time. We also identify several ecoregions where foundation species don’t respond to marine heatwaves, suggestive of some resilience to warming events. Cumulative marine heatwave intensity, absolute temperature, and location within a species’ range are key factors mediating impacts. Our results suggest many coastal ecosystems are losing foundation species, potentially impacting associated biodiversity, ecological function, and ecosystem services provision. Understanding relationships between marine heatwaves and foundation species offers the potential to predict impacts that are critical for developing management and adaptation approache

    Quantifying decadal stability of lake reflectance and chlorophyll-a from medium-resolution ocean color sensors

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    Multi-decadal time-series of Lake Water-Leaving Reflectance (LWLR), part of the Lakes Essential Climate Variable, have typically been interrupted for the 2012–2016 period due to lack of an ocean color sensor with ca�pabilities equivalent to MERIS (2002− 2012) and OLCI (2016 - present). Here we assess, for the first time, the suitability of MODIS/Aqua to estimate LWLR and the derived concentration of chlorophyll-a (Chla) at the global scale across optically complex water types, in an effort to fill these information gaps for climate studies. We first compare the normalized water-leaving reflectance (Rw) derived from two atmospheric correction algorithms (POLYMER and L2gen) against in situ observations. POLYMER shows superior performance, considering the agreement with in situ measurements and the number of valid outputs. An extensive assessment of nine Chla algorithms is then performed on POLYMER-corrected Rw from MODIS observations. The algorithms are tested both in original parameterizations and following calibration against in situ measurements of Chla. We find that the performance of algorithms parameterized per Optical Water Type (OWT) allows considerable improvement of the global Chla retrieval capability. Using 3 years of overlapping observations between MODIS/Aqua and MERIS (2009–2011) and OLCI (2017–2019), respectively, MODIS-derived reflectance and Chla products showed a reasonable degree of long-term stability in 48 inland water bodies. These water bodies, therefore, mark the candidates to study long-term environmental change

    The relative impact of co-occurring stressors on the abundance of benthic species examined with three-way correspondence analysis

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    This paper presents a novel application of three-way correspondence analysis as a technique to analyse three-way contingency tables with abundance scores of several species. The example data analysis presented was taken from a previous mesocosm experiment and consists of a two-factor experimental design with physical disturbance and organic enrichment as factors, applied to sediment collected from the Oslofjørd, Norway. The focus of the original research was to evaluate the influence of the two factors and their interactions on the abundance of the species present in the sediment. In the current paper we demonstrate that by using a three-way correspon�dence approach it is possible to undertake simultaneous analysis of the species, identifying and evaluating their relative sensitivity to the environmental factors thus adding additional insight than was possible in the original analysis. In particular, this new approach allowed even relatively scarce species to be included in the analysis and evaluated together with abundant species. This paper demonstrates how three-way correspondence analysis can be a useful analytical tool in teasing out effects and interactions from multi-factorial studies

    The ecological value of fully enforced, no-entry, marine protected areas: A case study of harvested limpets

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    1. Harvesting of intertidal gastropods can lead to a direct reduction in the biomass of targeted species through a reduction in the numbers and size of individuals, in turn leading to extensive changes to the structure of intertidal communities. 2. In the Azores, two patellid species co-occur, and both are exploited for human consumption. However, one of these species, Patella aspera (Röding, 1798), is larger and has a greater economic value and is thus favoured in comparison to the smaller Patella candei (d'Orbigny, 1840). 3. This study investigates the effects of human exploitation on the interaction between these two species by comparing their densities and sizes within two areas of a marine protected area (MPA): a no-entry area where human access is strictly prohibited and an adjacent area where human access is allowed and collection still occurs despite it being prohibited. 4. Patella aspera attained similar densities in the two areas, but individuals were much larger within the no-entry MPA. In contrast, P. candei were more abundant in the adjacent area but were of a similar size as in the no-entry MPA. Limpet biomass was much greater within the no-entry MPA. The abundance (% cover) of upright macroalgae and barnacles as well as bare rock were also significantly reduced within the no-entry MPA, where grazer-resistant algal crusts cover was significantly greater. 5. This study highlights the influence of human activities and how these may affect the complex dynamics of biotic interactions with wider community-level cascading effects

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