MycoNews 2023: Editorial, news, reports, awards, personalia, and book news.

This fifth annual edition of starts with an editorial on the critical importance of International Mycological Congresses (IMCs) to the health of mycology. Items on Counting down to IMC12, the State of the World’s Plants and Fungi 2023, and progress towards Improving nomenclatural stability in medically important fungi follow. Reports are provided of several mycological meetings in 2023: the Asian Mycological Congress, XIX Congress of European Mycologists, a meeting of European Mycological Groups and Societies, the XI Latin American Mycological Congress, Westerdijk Spring Symposium on Fungal Evolution, the Brazilian Society of Mycology, the Annual Meeting of the Mycological Society of China, and the Fifth Iranian Mycological Congress. Information is provided on how to make nominations for the various IMA Awards due to be presented at IMC12 in August, the new Future is Fungi Award launched in 2023, and the Adel-Azeem and Stamets Award for work on in Africa. The Westerdijk Fungal Biodiversity Institute Awards for 2023 were made to Andrey Yurkov and Cathie Aime and the citations to those awards are provided. We include tributes to the passing of two eminent mycologists, Lorelei Norvell and Takashi Matsushima, and also send birthday greetings to Bryce Kendrick who turned 90, and Maria Ławrynowicz, Yu Li, and Anthony Whalley who all became octogenarians. Reviews of seven mycological books published in 2022–2023 are included in the Book News section

Human influence on the distribution of cacao: insights from remote sensing and biogeography.

Cacao ( , Malvaceae) is an important tree crop in Africa and in the Americas. Current genomic evidence suggests that its original range in Tropical Americas was smaller than its current distribution and that human-mediated dispersal occurred before European colonization. This includes regions like Mesoamerica and Eastern Amazonia where cacao is supposedly naturally occurring. In this study, we utilize remote sensing and land use data to examine the influence of human activities on cacao-growing regions and explore patterns between cacao distribution and anthropized areas. By evaluating nearly nine thousand preserved specimen collections, we worked with a comprehensive occurrence dataset that considers taxonomy and distribution. We then analyzed remote sensing images of specimen locations and compared land use profiles of regions into which cacao was introduced with documented native areas. Our findings revealed a clear association between anthropized areas and cacao specimens, with the majority located in areas strongly affected by human activities. Conversely, regions closer to the proposed native range of cacao exhibit less human impact. These results, while accounting for sampling bias, reinforce the idea that humans may have played a significant role in cacao’s dispersal, even in parts of the Amazon where its native status remains uncertain. The discussion on cacao’s native range and identification of introduced areas hold implications for jurisdiction, access to genetic resources, and conservation efforts. Additionally, it is relevant to debates surrounding the repatriation of genetic data of economically important crops. Understanding the historical human influence on cacao’s distribution is crucial for addressing issues of crop improvement, conservation, and sustainable use

Repeated upslope biome shifts in Saxifraga during late-Cenozoic climate cooling.

Mountains are among the most biodiverse places on Earth, and plant lineages that inhabit them have some of the highest speciation rates ever recorded. Plant diversity within the alpine zone - the elevation above which trees cannot grow—contributes significantly to overall diversity within mountain systems, but the origins of alpine plant diversity are poorly understood. Here, we quantify the processes that generate alpine plant diversity and their changing dynamics through time in (Saxifragaceae), an angiosperm genus that occurs predominantly in mountain systems. We present a time-calibrated molecular phylogenetic tree for the genus that is inferred from 329 low-copy nuclear loci and incorporates 73% (407) of known species. We show that upslope biome shifts into the alpine zone are considerably more prevalent than dispersal of alpine specialists between regions, and that the rate of upslope biome shifts increased markedly in the last 5 Myr, a timeframe concordant with a cooling and fluctuating climate that is likely to have increased the extent of the alpine zone. Furthermore, alpine zone specialists have lower speciation rates than generalists that occur inside and outside the alpine zone, and major speciation rate increases within significantly pre-date increased rates of upslope biome shifts. Specialisation to the alpine zone is not therefore associated with speciation rate increases. Taken together, this study presents a quantified and broad scale perspective of processes underpinning alpine plant diversity

Growth, Enzymatic, and Transcriptomic Analysis of xyr1 Deletion Reveals a Major Regulator of Plant Biomass-Degrading Enzymes in Trichoderma harzianum.

The regulation of plant biomass degradation by fungi is critical to the carbon cycle, and applications in bioproducts and biocontrol. Trichoderma harzianum is an important plant biomass degrader, enzyme producer, and biocontrol agent, but few putative major transcriptional regulators have been deleted in this species. The T. harzianum ortholog of the transcriptional activator XYR1/XlnR/XLR-1 was deleted, and the mutant strains were analyzed through growth profiling, enzymatic activities, and transcriptomics on cellulose. From plate cultures, the Δxyr1 mutant had reduced growth on D-xylose, xylan, and cellulose, and from shake-flask cultures with cellulose, the Δxyr1 mutant had ~90% lower β-glucosidase activity, and no detectable β-xylosidase or cellulase activity. The comparison of the transcriptomes from 18 h shake-flask cultures on D-fructose, without a carbon source, and cellulose, showed major effects of XYR1 deletion whereby the Δxyr1 mutant on cellulose was transcriptionally most similar to the cultures without a carbon source. The cellulose induced 43 plant biomass-degrading CAZymes including xylanases as well as cellulases, and most of these had massively lower expression in the Δxyr1 mutant. The expression of a subset of carbon catabolic enzymes, other transcription factors, and sugar transporters was also lower in the Δxyr1 mutant on cellulose. In summary, T. harzianum XYR1 is the master regulator of cellulases and xylanases, as well as regulating carbon catabolic enzymes

An ancient Mesopotamian herbal.

Throughout the world, traditional medical systems continue to be important to healthcare. They vary greatly in their underlying beliefs, but almost all share the use of herbal medicines as a central practice. Ancient Mesopotamia – the area of modern-day Iraq and adjoining regions – offers a special opportunity to study such medical practice in antiquity. Many thousands of clay tablets survive, some over 5,000 years old, bearing texts relating to life in the past. Drawing on the expertise of Assyriologists, botanists and archaeologists, An Ancient Mesopotamian Herbal explores the deep history of plants in traditional medicine and offers a groundbreaking reassessment of existing research. Combining methods from the humanities and science, the authors provide a concise overview of ancient Mesopotamian culture and herbal lore, along with new identifications of Assyrian and Babylonian herbal medicines, focusing on 25 case studies

Reflections on Rising Tide

In August 2023 Rising Tide: Art and Environment in Oceania opened at the National Museum of Scotland. Here, members of the exhibition team consider how the design and build of the exhibition reflect its core themes, the Museum’s commitment to sustainability and how working with communities in the construction of exhibitions can help engage people in environmental issues