We present a method for the reconstruction of networks, based on the order of
nodes visited by a stochastic branching process. Our algorithm reconstructs a
network of minimal size that ensures consistency with the data. Crucially, we
show that global consistency with the data can be achieved through purely local
considerations, inferring the neighbourhood of each node in turn. The
optimisation problem solved for each individual node can be reduced to a Set
Covering Problem, which is known to be NP-hard but can be approximated well in
practice. We then extend our approach to account for noisy data, based on the
Minimum Description Length principle. We demonstrate our algorithms on
synthetic data, generated by an SIR-like epidemiological model.Comment: Under consideration for the ECML PKDD 2010 conferenc
