Monte Carlo Simulation on Complex Formation of Proteins and Polysaccharides

Abstract

In protein–polysaccharide complex systems, how nonspecific interactions such as electrostatic and van der Waals interactions affect complex formation has not been clearly understood. On the basis of a coarse-grained model with the specificity of a target system, we have applied Monte Carlo (MC) simulation to illustrate the process of complex coacervate formation from the association of proteins and polysaccharides. The coarse-grained model is based on serum albumin and a polycation system, and the MC simulation of pH impact on complex coacervation has been carried out. We found that complex coacervates could form three ways, but the conventional association through electrostatic attraction between the protein and polysaccharide still dominated the complex coacervation in such systems. We also observed that the depletion potential always participated in protein crowding and was weakened in the presence of strong electrostatic interactions. Furthermore, we observed that the sizes of polysaccharide chains nonmonotonically increased with the number of bound proteins. Our approach provides a new way to understand the details during protein–polysaccharide complex coacervation at multiple length scales, from interaction and conformation to aggregation