<p>Upper: distribution of areas with modeled habitat suitability of cacao during the LGM; red dashed polygons show potential relatively isolated refugia associated with areas holding high levels of locally common alleles. Lower: changes in cacao habitat suitability from the LGM until present; red areas represent potential habitat suitability during LGM but no longer at present (high impact or restriction areas); green indicates areas with continued habitat suitability from LGM until present (low impact or stable areas); and blue indicates areas that were probably not suitable for cacao at the LGM, but are suitable at present (new or expansion areas).</p