Abstract

<p>Hyb-Seq data matrices used by Weitemier et al. for phylogenomic analyses of <em>Asclepias. </em> </p> <p> </p> <p>Weitemier_et_al_Asclepias_syriaca_single_copy_gene_exons.fasta contains the sequences of the targeted exons used for probe design. </p> <p> </p> <p>Weitemier_et_al_plastome.phy contains the whole plastome matrix.</p> <p> </p> <p>Weitemier_et_al_nuclear_concatenated.phy contains a concatenation of all 768 putatively single-copy gene matrices.</p> <p> </p> <p>Weitemier_et_al_nuclear_gene_matrices.tgz is a gzipped tarball of the 768 individual matrices for the putatively single-copy genes. Note that the exons of each gene are concatenated in no particular order.</p> <p> </p> <p>Weitemier_et_al_nuclear_concatenated.tre contains the best ML tree for the concatenation matrix with bootstrap support values.</p> <p> </p> <p>Weitemier_et_al_plastome.tre contains the best ML tree for the plastome matrix with bootstrap support values.</p> <p> </p> <p>Weitemier_et_al_nuclear_gene_trees.tgz contains the bootstrap trees from the ML analysis of each nuclear gene.</p> <p> </p> <p> Weitemier_et_al_MP-EST_species_tree.tre contains the MP-EST species tree with bootstrap values.</p

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