Summary of the intrastrain variable sites identified within Illumina sequencing reads in investigated treponemal genomes.
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Abstract
<p>Illumina-identified intrastrain variable sites were verified using 454 or Sanger sequencing.</p><p><sup>a</sup>no intrastrain heterogeneous site were identified in the TPA Mexico A, TPE CDC-2, TPE Gauthier, TPE Fribourg-Blanc and TPLC Cuniculi A genomes</p><p><sup>b</sup>nonconservative amino acid replacements are not listed</p><p><sup>c</sup>if not indicated, localization was predicted by PSORTb</p><p><sup>d</sup>not applicable</p><p><sup>e</sup>[<a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0004110#pntd.0004110.ref020" target="_blank">20</a>],[<a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0004110#pntd.0004110.ref023" target="_blank">23</a>]</p><p><sup>f</sup>variable number of direct repeat (TCCTCCCCC)</p><p>Summary of the intrastrain variable sites identified within Illumina sequencing reads in investigated treponemal genomes.</p
