Additional file 10: Figure S6. of Evaluation of logistic regression models and effect of covariates for case–control study in RNA-Seq analysis

Abstract

Bias from regression methods using the permuted HD data with μ g  > 3. Figure S6 contains bias from Negative Binomial regression using DESeq2, Classical Logistic regression (CL), Bayes Logistic regression (BL), and Firth’s Logistic regression (FL). Each black empty dot represents the bias of a gene. The black dotted horizontal line is no bias point. The bias of each gene is calculated using effect sizes of 10,000 permutations. (PNG 53 kb