Additional file 13: Table S4. of Evaluation of logistic regression models and effect of covariates for case–control study in RNA-Seq analysis

Abstract

Top 10 significant genes from DESeq2 among genes not significant in logistic regressions. Mean.Exp.Case: Normalized mean expression value in cases, Mean.Exp.Cont: Normalized mean expression value in controls, Disp: Dispersion, NB.Pval: P-values from negative binomial regression with true dispersion, CL.Pval: P-values from classical logistic regression, BL.Pval: P-values from Bayes logistic regression, FL.Pval: P-values from Firth’s logistic regression. (DOCX 53 kb