Abundance dynamics of gut microbiomes of three individuals under treatment with antibiotic Ciprofloxacin (Cp).

Abstract

(A) NRADs before (green), during (red), and after (blue) treatment. Bold lines are mean NRADs, shaded regions are 90% confidence intervals of the means. (B) MDS of NRADs with one point per NRAD using the same color code as in panel A. For each of the three individuals, arrows connect points corresponding to the last measurement before treatment, measurements during treatment, and the first measurement after treatment. The two coordinates of the MDS plot explain 89% of the NRAD distances.</p