Labeled Directed Acyclic Graphs: a generalization of context-specific independence in directed graphical models

We introduce a novel class of labeled directed acyclic graph (LDAG) models for finite sets of discrete variables. LDAGs generalize earlier proposals for allowing local structures in the conditional probability distribution of a node, such that unrestricted label sets determine which edges can be deleted from the underlying directed acyclic graph (DAG) for a given context. Several properties of these models are derived, including a generalization of the concept of Markov equivalence classes. Efficient Bayesian learning of LDAGs is enabled by introducing an LDAG-based factorization of the Dirichlet prior for the model parameters, such that the marginal likelihood can be calculated analytically. In addition, we develop a novel prior distribution for the model structures that can appropriately penalize a model for its labeling complexity. A non-reversible Markov chain Monte Carlo algorithm combined with a greedy hill climbing approach is used for illustrating the useful properties of LDAG models for both real and synthetic data sets.Comment: 26 pages, 17 figure

Locally Testable Codes and Cayley Graphs

We give two new characterizations of (\F_2-linear) locally testable error-correcting codes in terms of Cayley graphs over \F_2^h: \begin{enumerate} \item A locally testable code is equivalent to a Cayley graph over \F_2^h whose set of generators is significantly larger than $h$ and has no short linear dependencies, but yields a shortest-path metric that embeds into $\ell_1$ with constant distortion. This extends and gives a converse to a result of Khot and Naor (2006), which showed that codes with large dual distance imply Cayley graphs that have no low-distortion embeddings into $\ell_1$. \item A locally testable code is equivalent to a Cayley graph over \F_2^h that has significantly more than $h$ eigenvalues near 1, which have no short linear dependencies among them and which "explain" all of the large eigenvalues. This extends and gives a converse to a recent construction of Barak et al. (2012), which showed that locally testable codes imply Cayley graphs that are small-set expanders but have many large eigenvalues. \end{enumerate}Comment: 22 page