17 research outputs found

    Acristatellus_alignment

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    alignment for mtDNA ND2 locu

    cyprinid_morphometric_data

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    Morphological data for cyprinid minnows used in empirical data analysis. Data from Hulsey and Hollingsworth (2011; Biol. J. Linn. Soc 103: 136-146)

    Cyprinid_tree

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    Tree file used for analysis of empirical data. Tree is from Hulsey and Hollingsworth (2011; Biol. J. Linn. Soc. 103: 136-146)

    Reproducible analysis R markdown (.Rmd) file

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    This file contains original code for all the analyses of the paper. It can be run (after installing knitr and required software) with the command: knit2html("Revell-etal-2015.dryad-code.Rmd"), for instance

    data for common garden individuals

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    All adults measured at time of specimen preparation at end of egg-laying. All F1 measured at approximately 365 days post-hatching. NA鈥檚 exist in the data where injury, illness, or other factors made it difficult to confidently measure a variable. Comma-separated data file containing the following variables, all morphological variables in mm: * ID: unique ID for each animal * generation: F1 for offspring, P for parental (wildcaught) * dam: mother for offspring * context: natural or urban * sex: male or female (a small number of animals we were unable to confidently sex at time of death or measurement) * front_lamellae1 & front_lamellae2: counts of front lamellae numbers from scans * rear_lamellae1 & rear_lamellae2: counts of rear lamellae numbers from scans * rMETC & lMETC: right and left metacarpal * rRAD & lRAD: right and left radius * rULM & lULN: right and left ulna * rHUM & lHUM: right and left humerus * rFEM & lFEM: right and left femur * rTIB & lTIB: right and left tibia * rFIB & lFIB: right and left fibula * rMET1, rMET2, lMET1, lMET2: right and left metatarsals (1st and 2nd) * SVL: internally measured snout-vent-length (mm

    data for wild-caught individuals

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    All animals measured were adult males. Comma-separated data file containing the following variables, all morphological variables in mm unless otherwise noted: * ID: unique ID for each animal * date (YYYY_MM_DD): date of capture and measurement * Site: municipality of population * context: natural or urban * perch: perch type * bodytemp.C: body temperature (C) at time of capture * perch.temp.C: perch temperature (C) at time of capture * ambient.temp.C: air temperature (C) at perch location at time of capture * humidity.percent: percent humidity at perch location at time of capture * perch.height.cm: height to perch location (cm) * perch.diam.cm: diameter at perch location (cm) * weight.g: lizard weight (g) * head.height.mm: externally measured head height (mm) * svl.mm: externally measured snout-vent length (mm) * local.time.decimal: time of capture in decimal format * flags: data flags (ground animals and sick animals) * JL: right and left averaged jaw length (measured from xray) * JW: jaw width (measured from xray) * METC: right and left averaged metacarpals * RAD: right and left averaged radius * ULN: right and left averaged ulna * HUM: right and left averaged humerus * FEM: right and left averaged femur * TIB: right and left averaged tibia * FIB: right and left averaged fibula * METT1 & METT2: right and left metatarsals averaged (1st and 2nd) * FL: total forelimb length * HL: total hindlimb lengt
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