79 research outputs found

    SNP_PODO_HET50-MINFREQ-15

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    vcf produce when calling SNP on Podoccocus ssp. (enriched, genomic and LRPCR libraries) with Mpileup -Bg and Varscan (min_freq_for_hom =0.5 and --min-var-freq 0.15

    Pb-Podo5-1-R2T53_R1R2.fastq

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    Podococcus barteri Podo 5-1 sample - Whole genome sequencing (MiSeq) - .bam file containing reads after mapping on the chloroplast genom

    TOG6208_cp_RUN1-TAG2-4_10-12.bam

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    O. glaberrima TOG6028 sample - LRPCR library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used

    CR659_Run10-TAG-70

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    Dioscorea rotundata CR659 sample - Whole genome sequencing (MiSeq) - .bam file containing reads after mapping on the chloroplast genom
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