37 research outputs found
Tuning Effects for Some Cyclic Aromatic Carbenes Bearing Remote Amino Groups
Yamamoto and co-workers synthesized
two cyclic aromatic carbenes
with remote amino groups. Here we theoretically studied related compounds
to explore tuning effects on the singletātriplet splitting
by variations of functional groups. For the Yamamoto compound, the
lowest singlet state lies 15.7 kcal/mol below the lowest triplet.
The singletātriplet separation is reduced by ā¼7 kcal/mol
when the dimethylamino groups are replaced by H. In one set of carbenes,
when X = O, we substitute S, Se, Te, SO, SeO, and TeO for X; the resulting
Ī<i>E</i>(SāT) predictions are 9.9, 7.3, 3.9,
4.3, 2.3, and ā0.1 kcal/mol, respectively. A different set
of X fragments yields triplet electronic ground states with Ī<i>E</i>(SāT) values of ā8.6 (X = BH), ā6.8
(X = AlH), ā7.2 (X = GaH), ā7.5 (X = InH), and ā7.0
kcal/mol (X = TlH). We also predicted Ī<i>E</i>(SāT)
with NĀ(CH<sub>3</sub>)<sub>2</sub> replaced by PH<sub>2</sub>, AsH<sub>2</sub>, SbH<sub>2</sub>, BiH<sub>2</sub>, BH<sub>2</sub>, CH<sub>3</sub>, OH, and F. Of all the molecules considered, that with NĀ(CH<sub>3</sub>)<sub>2</sub> replaced with BH<sub>2</sub> and X = BH most
favors the triplet state, lying 13.7 kcal/mol below the singlet. Finally,
we have relocated the NĀ(CH<sub>3</sub>)<sub>2</sub> and NH<sub>2</sub> groups from the (3, 6) positions to the (4, 5), (2, 7), and (1,
8) terminal ring positions, with very interesting results
Major Differences between the Binuclear Manganese Boronyl Carbonyl Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> and Its Isoelectronic Chromium Carbonyl Analogue Cr<sub>2</sub>(CO)<sub>11</sub>
The lowest energy structures of the
manganese boronyl carbonyl
Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> by more than 8 kcal/mol
are found to have a single end-to-end bridging BO group bonding to
one manganese atom through its boron atom and to the other manganese
atom through its oxygen atom. The long MnĀ·Ā·Ā·Mn distances
in these structures indicate the lack of direct manganeseāmanganese
bonding as confirmed by essentially zero Wiberg bond indices. These
Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> structures are favored
thermochemically by more than 25 kcal/mol over dissociation into mononuclear
fragments and thus appear to be viable synthetic objectives. This
contrasts with the isoelectronic Cr<sub>2</sub>(CO)<sub>11</sub> system,
which is predicted to be disfavored relative to the mononuclear fragments
CrĀ(CO)<sub>6</sub> + CrĀ(CO)<sub>5</sub>. Analogous Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> structures with an end-to-end bridging CO
group lie ā¼17 kcal/mol in energy above the corresponding structures
with end-to-end bridging BO groups. The lowest energy Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> structures without an end-to-end
bridging BO group provide unprecedented examples of the coupling of
two terminal BO groups to form a terminal dioxodiborene (B<sub>2</sub>O<sub>2</sub>) ligand with a BāB distance of ā¼1.9 Ć
.
Still higher energy Mn<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>9</sub> structures include singly bridged and doubly semibridged structures
analogous to the previously optimized lowest energy Cr<sub>2</sub>(CO)<sub>11</sub> structures
Prospects for Three-Electron Donor Boronyl (BO) Ligands and Dioxodiborene (B<sub>2</sub>O<sub>2</sub>) Ligands as Bridging Groups in Binuclear Iron Carbonyl Derivatives
Recent experimental work (2010) on (Cy<sub>3</sub>P)<sub>2</sub>PtĀ(BO)Br indicates that the oxygen atom of the boronyl (BO)
ligand
is more basic than that in the ubiquitous CO ligand. This suggests
that bridging BO ligands in unsaturated binuclear metal carbonyl derivatives
should readily function as three-electron donor bridging ligands involving
both the oxygen and the boron atoms. In this connection, density functional
theory shows that three of the four lowest energy singlet Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>7</sub> structures have such a bridging
Ī·<sup>2</sup>-Ī¼-BO group as well as a formal FeāFe
single bond. In addition, all four of the lowest energy singlet Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>6</sub> structures have two bridging
Ī·<sup>2</sup>-Ī¼-BO groups and formal FeāFe single
bonds. Other Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub><i>n</i></sub> (<i>n</i> = 7, 6) structures are found in which
the two BO groups have coupled to form a bridging dioxodiborene (B<sub>2</sub>O<sub>2</sub>) ligand with BāB bonding distances of
ā¼1.84 Ć
. All of these Fe<sub>2</sub>(Ī¼-B<sub>2</sub>O<sub>2</sub>)Ā(CO)<sub><i>n</i></sub> structures have long
FeĀ·Ā·Ā·Fe distances indicating a lack of direct ironāiron
bonding. One of the singlet Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>7</sub> structures has such a bridging dioxodiborene ligand with
cis stereochemistry functioning as a six-electron donor to the pair
of iron atoms. In addition, the lowest energy triplet structures for
both Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>7</sub> and Fe<sub>2</sub>(BO)<sub>2</sub>(CO)<sub>6</sub> have bridging dioxodiborene ligands
with trans stereochemistry functioning as a four-electron donor to
the pair of iron atoms
The Hydrogen Abstraction Reaction H<sub>2</sub>S + OH ā H<sub>2</sub>O + SH: Convergent Quantum Mechanical Predictions
The hydrogen abstraction
reaction H<sub>2</sub>S + OH ā
H<sub>2</sub>O + SH has been studied using the āgold standardā
CCSDĀ(T) method along with the Dunningās aug-cc-pVXZ (up to
5Z) basis sets. For the reactant (entrance) complex, the CCSDĀ(T) method
predicts a HSHĀ·Ā·Ā·OH hydrogen-bonded structure to be
lowest-lying, and the other lower-lying isomers, including the two-center
three-electron hemibonded structure H<sub>2</sub>SĀ·Ā·Ā·OH,
have energies within 2 kcal/mol. The similar situation is for the
product (exit) complex. With the aug-cc-pV5Z single point energies
at the aug-cc-pVQZ geometry, the dissociation energy for the reactant
complex to the reactants (H<sub>2</sub>S + OH) is predicted to be
3.37 kcal/mol, and that for the product complex to the products (H<sub>2</sub>O + SH) is 2.92 kcal/mol. At the same level of theory, the
classical barrier height is predicted to be only 0.11 kcal/mol. Thus,
the OH radical will react promptly with H<sub>2</sub>S in the atmosphere.
We have also tested the performance of 29 density functional theory
(DFT) methods for this reaction. Most of them can reasonably predict
the reaction energy, but the different functional give quite different
energy barriers, ranged from ā10.3 to +2.8 kcal/mol, suggesting
some caution in choosing density functionals to explore the PES of
chemical reactions
Versatile Behavior of the Fluorophosphinidene Ligand in Iron Carbonyl Chemistry
Fluorophosphinidene (PF) is a versatile ligand found
experimentally
in the transient species MĀ(CO)<sub>5</sub>(PF) (M = Cr, Mo) as well
as the stable cluster Ru<sub>5</sub>(CO)<sub>15</sub>(Ī¼<sub>4</sub>-PF). The PF ligand can function as either a bent two-electron
donor or a linear four-electron donor with the former being more common.
The mononuclear tetracarbonyl FeĀ(PF)Ā(CO)<sub>4</sub> is predicted
to have a trigonal bipyramidal structure analogous to FeĀ(CO)<sub>5</sub> but with a bent PF ligand replacing one of the equatorial CO groups.
The tricarbonyl FeĀ(PF)Ā(CO)<sub>3</sub> is predicted to have two low-energy
singlet structures, namely, one with a bent PF ligand and a 16-electron
iron configuration and the other with a linear PF ligand and the favored
18-electron iron configuration. Low-energy structures of the dicarbonyl
FeĀ(PF)Ā(CO)<sub>2</sub> have bent PF ligands and triplet spin multiplicities.
The lowest energy structures of the binuclear Fe<sub>2</sub>(PF)Ā(CO)<sub>8</sub> and Fe<sub>2</sub>(PF)<sub>2</sub>(CO)<sub>7</sub> derivatives
are triply bridged structures analogous to the experimental structure
of the analogous Fe<sub>2</sub>(CO)<sub>9</sub>. The three bridges
in each Fe<sub>2</sub>(PF)Ā(CO)<sub>8</sub> and Fe<sub>2</sub>(PF)<sub>2</sub>(CO)<sub>7</sub> structure include all of the PF ligands.
Other types of low-energy Fe<sub>2</sub>(PF)<sub>2</sub>(CO)<sub>7</sub> structures include the phosphorus-bridging carbonyl structure (FP)<sub>2</sub>COFe<sub>2</sub>(CO)<sub>6</sub>, lying only ā¼2 kcal/mol
above the global minimum, as well as an Fe<sub>2</sub>(CO)<sub>7</sub>(Ī¼-P<sub>2</sub>F<sub>2</sub>) structure in which the two PF
groups have coupled to form a difluorodiphosphene ligand unsymmetrically
bridging the central Fe<sub>2</sub> unit
The Symmetric Exchange Reaction OH + H<sub>2</sub>O ā H<sub>2</sub>O + OH: Convergent Quantum Mechanical Predictions
The symmetric hydrogen exchange reaction
OH + H<sub>2</sub>O ā
H<sub>2</sub>O + OH has been studied using the āgold standardā
CCSDĀ(T) method with the correlation-consistent basis sets up to aug-cc-pV5Z.
The CCSDT and CCSDTĀ(Q) methods were used for the final energic predictions.
Two entrance complexes and two transition states on the H<sub>3</sub>O<sub>2</sub> potential surface were located. The vibrational frequencies
and the zero-point vibrational energies of these stationary points
for the reaction are reported. The entrance complex H<sub>2</sub>OĀ·Ā·Ā·HO
is predicted to lie 3.7 kcal mol<sup>ā1</sup> below the separated
reactants, whereas the second complex HOHĀ·Ā·Ā·OH lies
only 2.1 kcal mol<sup>ā1</sup> below the separated reactants.
The classical barrier height for the title reaction is predicted to
be 8.4 kcal mol<sup>ā1</sup>, and the transition state between
the two complexes is only slightly higher than the second complex.
We estimate a reliability of Ā±0.2 kcal mol<sup>ā1</sup> for these predictions. The capabilities of different density functional
theory methods is also tested for this reaction
MetalāSubstrate Cooperation Mechanism for Dehydrogenative Amidation Catalyzed by a PNN-Ru Catalyst
The pyridine-based
PNN ruthenium pincer complex (PNN)ĀRuĀ(CO)Ā(H) can catalyze the well-known
dehydrogenative amidation reaction, but the mechanism is not fully
understood. In this work, we find there exists an alternative metalāsubstrate
cooperation mechanism in this reaction system, which is more favorable
than the aromatizationādearomatization mechanism. The possible
reaction of the excess base <i>t</i>-BuO<sup>ā</sup> with catalyst species (PNN)ĀRuĀ(CO)Ā(H) is studied, indicating <i>t</i>-BuO<sup>ā</sup> is able to facilitate the ligand
substitution and enhance catalytic activities. With the bifunctional
RuāN moiety, the imine-substituted species (PN)Ā(imine)ĀRuĀ(CO)Ā(H) <b>5</b> could serve as an alternative catalytic species and efficiently
facilitate some elementary steps such as the hydrogen transfer, hydrogen
elimination, and CāN coupling. Meanwhile, the CāN coupling
step proceeds via the split of aldehydic CāH bond across the
RuĀ(II)āimine bond, which results in an amide bond directly.
The hemiaminal is uninvolved in the CāN coupling process. Finally,
the formation of linear peptides and cyclic dipeptides are unveiled
by the newly proposed mechanism. The metalāsubstrate cooperation
could widely exist in transition metal catalyst systems with a large
influence on the reaction activity
The Energy Difference between the Triply-Bridged and All-Terminal Structures of Co<sub>4</sub>(CO)<sub>12</sub>, Rh<sub>4</sub>(CO)<sub>12</sub>, and Ir<sub>4</sub>(CO)<sub>12</sub>: A Difficult Test for Conventional Density Functional Methods
The
M<sub>4</sub>(CO)<sub>12</sub> molecules Co<sub>4</sub>(CO)<sub>12</sub>, Rh<sub>4</sub>(CO)<sub>12</sub>, and Ir<sub>4</sub>(CO)<sub>12</sub> have two low-lying structures, the all-terminal structure
with <i>T</i><sub><i>d</i></sub> symmetry and
the triply bridged structure with <i>C</i><sub>3<i>v</i></sub> symmetry. A total of 45 density functional theory
(DFT) methods have been used to predict structures and vibrational
frequencies for Co<sub>4</sub>(CO)<sub>12</sub>, Rh<sub>4</sub>(CO)<sub>12</sub>, and Ir<sub>4</sub>(CO)<sub>12</sub>. The different DFT
methods show a broad range of energy differences Ī<i>E</i> = <i>E</i><sub><i>T</i><sub><i>d</i></sub></sub> ā <i>E</i><sub><i>C</i><sub>3<i>v</i></sub></sub>. For Rh<sub>4</sub>(CO)<sub>12</sub>, none of the 45 DFT predictions is within 11 kcal/mol of the 2005
experimental value of 5.1 Ā± 0.6 kcal/mol reported by Allian and
Garland (Dalton Trans. 2005, 1957ā1965). For the challenging Ir<sub>4</sub>(CO)<sub>12</sub> molecule, 21 DFT methods predict the correct <i>T</i><sub><i>d</i></sub> structure, while 24 DFT methods predict
the <i>C</i><sub>3<i>v</i></sub> structure to
lie lower in energy. This research reveals many peculiar problems
in the computation of the vibrational frequencies for the all-terminal
structure
MolybdenumāMolybdenum Multiple Bonding in Homoleptic Molybdenum Carbonyls: Comparison with Their Chromium Analogues
The binuclear molybdenum carbonyls Mo<sub>2</sub>(CO)<sub><i>n</i></sub> (<i>n</i> = 11, 10, 9, 8) have
been studied
by density functional theory using the BP86 and MPW1PW91 functionals.
The lowest energy Mo<sub>2</sub>(CO)<sub>11</sub> structure is a singly
bridged singlet structure with a MoāMo single bond. This structure
is essentially thermoneutral toward dissociation into MoĀ(CO)<sub>6</sub> + MoĀ(CO)<sub>5</sub>, suggesting limited viability similar to the
analogous Cr<sub>2</sub>(CO)<sub>11</sub>. The lowest energy Mo<sub>2</sub>(CO)<sub>10</sub> structure is a doubly semibridged singlet
structure with a Moī»Mo double bond. This structure is essentially
thermoneutral toward disproportionation into Mo<sub>2</sub>(CO)<sub>11</sub> + Mo<sub>2</sub>(CO)<sub>9</sub>, suggesting limited viability.
The lowest energy Mo<sub>2</sub>(CO)<sub>9</sub> structure has three
semibridging CO groups and a Moī¼Mo triple bond analogous to
the lowest energy Cr<sub>2</sub>(CO)<sub>9</sub> structure. This structure
appears to be viable toward CO dissociation, disproportionation into
Mo<sub>2</sub>(CO)<sub>10</sub> + Mo<sub>2</sub>(CO)<sub>8</sub>,
and fragmentation into MoĀ(CO)<sub>5</sub> + MoĀ(CO)<sub>4</sub> and
thus appears to be a possible synthetic objective. The lowest energy
Mo<sub>2</sub>(CO)<sub>8</sub> structure has one semibridging CO group
and a Moī¼Mo triple bond similar to that in the lowest energy
Mo<sub>2</sub>(CO)<sub>9</sub> structure. This differs from the lowest
energy Cr<sub>2</sub>(CO)<sub>8</sub> structure, which is a triply
bridged structure. A higher energy unbridged <i>D</i><sub>2<i>d</i></sub> Mo<sub>2</sub>(CO)<sub>8</sub> structure
was found with a very short MoāMo distance of 2.6 Ć
. This
interesting structure has two degenerate imaginary vibrational frequencies.
Following the corresponding normal modes leads to a Mo<sub>2</sub>(CO)<sub>8</sub> structure, lying ā¼5 kcal/mol above the global
minimum, with two four-electron donor bridging CO groups and a Moī»Mo
distance suggesting a formal double bond. All of the triplet Mo<sub>2</sub>(CO)<sub><i>n</i></sub> (<i>n</i> = 10,
9, 8) structures were found to be relatively high energy structures,
lying at least 22 kcal/mol above the corresponding global minimum.
The singletātriplet splittings for the Mo<sub>2</sub>(CO)<sub><i>n</i></sub> (<i>n</i> = 10, 9, 8) structures
are significantly higher than those of the Cr<sub>2</sub>(CO)<sub><i>n</i></sub> analogues. The MoāMo Wiberg bond
indices confirm our assigned bond orders based on predicted bond distances
CarbonāHydrogen Activation in Zerovalent Bis(1,5-cyclooctadiene) Complexes of the First Row Transition Metals: A Theoretical Study
Stepwise interaction
of first row transition metal atoms with 1,5-cyclooctadiene
to give (C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>M complexes is studied
using the M06-L/DZP density functional method. The experimentally
known (C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>Ni is the thermodynamically
most favorable complex, with a predicted geometry consistent with
its experimental structure as determined by X-ray crystallography.
The other transition metal atoms from scandium to zinc also interact
exothermically with 1,5-cyclooctadiene to give (C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>M derivatives, but these exhibit lower symmetry
than the <i>S</i><sub>4</sub> symmetry exhibited by (C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>Ni. Carbonāhydrogen activation
of CH<sub>2</sub> groups in a C<sub>8</sub>H<sub>12</sub> ligand is
predicted for most systems. Thus, conversion of (Ī·<sup>2,2</sup>-C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>M to (Ī·<sup>3,2</sup>-C<sub>8</sub>H<sub>11</sub>)Ā(Ī·<sup>2,1</sup>-C<sub>8</sub>H<sub>13</sub>)ĀM, through a hydride intermediate (Ī·<sup>3,2</sup>-C<sub>8</sub>H<sub>11</sub>)Ā(Ī·<sup>2,2</sup>-C<sub>8</sub>H<sub>12</sub>)ĀMH, is predicted for scandium, vanadium, chromium,
manganese, and cobalt. For titanium with a low-lying empty orbital,
further CāH activation through a hydride intermediate (Ī·<sup>6</sup>-C<sub>8</sub>H<sub>10</sub>)Ā(Ī·<sup>2,1</sup>-C<sub>8</sub>H<sub>13</sub>)ĀTiH is predicted, leading ultimately to (Ī·<sup>6</sup>-C<sub>8</sub>H<sub>10</sub>)Ā(Ī·<sup>1,1</sup>-C<sub>8</sub>H<sub>14</sub>)ĀTi, in which the hexahapto Ī·<sup>6</sup>-C<sub>8</sub>H<sub>10</sub> ligand is shown by NICS to be aromatic.
These two CāH activation processes on a titanium center represent
the dehydrogenation of 1,5-cyclooctadiene to 1,3,5-cyclooctatriene
with the second 1,5-cyclooctadiene ligand as the hydrogen acceptor.
For zinc CāH activation terminates at (Ī·<sup>1</sup>-C<sub>8</sub>H<sub>11</sub>)Ā(C<sub>8</sub>H<sub>12</sub>)ĀZnH, which has
a CāZnāH three-center bond. No energetically favorable
CāH activation processes are predicted for the iron, nickel,
and copper (Ī·<sup>2,2</sup>-C<sub>8</sub>H<sub>12</sub>)<sub>2</sub>M derivatives